FK131_ARATH
ID FK131_ARATH Reviewed; 403 AA.
AC Q6NL02; Q9FKA6;
DT 10-AUG-2010, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=F-box/kelch-repeat protein At5g39560;
GN OrderedLocusNames=At5g39560; ORFNames=MIJ24.5;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9734815; DOI=10.1093/dnares/5.3.203;
RA Kotani H., Nakamura Y., Sato S., Asamizu E., Kaneko T., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VI. Sequence
RT features of the regions of 1,367,185 bp covered by 19 physically assigned
RT P1 and TAC clones.";
RL DNA Res. 5:203-216(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Cheuk R.F., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB08887.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AB012243; BAB08887.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002688; AED94447.1; -; Genomic_DNA.
DR EMBL; BT011234; AAR92270.1; -; mRNA.
DR EMBL; BT012541; AAS99685.1; -; mRNA.
DR RefSeq; NP_198772.2; NM_123318.3.
DR AlphaFoldDB; Q6NL02; -.
DR SMR; Q6NL02; -.
DR STRING; 3702.AT5G39560.1; -.
DR iPTMnet; Q6NL02; -.
DR PaxDb; Q6NL02; -.
DR PRIDE; Q6NL02; -.
DR ProteomicsDB; 230424; -.
DR EnsemblPlants; AT5G39560.1; AT5G39560.1; AT5G39560.
DR GeneID; 833952; -.
DR Gramene; AT5G39560.1; AT5G39560.1; AT5G39560.
DR KEGG; ath:AT5G39560; -.
DR Araport; AT5G39560; -.
DR TAIR; locus:2164845; AT5G39560.
DR eggNOG; KOG1072; Eukaryota.
DR HOGENOM; CLU_032521_1_2_1; -.
DR InParanoid; Q6NL02; -.
DR OMA; KLVVMWR; -.
DR OrthoDB; 1055448at2759; -.
DR PhylomeDB; Q6NL02; -.
DR PRO; PR:Q6NL02; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q6NL02; baseline and differential.
DR Genevisible; Q6NL02; AT.
DR GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR Gene3D; 2.120.10.80; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR015915; Kelch-typ_b-propeller.
DR InterPro; IPR006652; Kelch_1.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF01344; Kelch_1; 2.
DR SMART; SM00256; FBOX; 1.
DR SMART; SM00612; Kelch; 2.
DR SUPFAM; SSF117281; SSF117281; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Kelch repeat; Reference proteome; Repeat.
FT CHAIN 1..403
FT /note="F-box/kelch-repeat protein At5g39560"
FT /id="PRO_0000396073"
FT DOMAIN 26..72
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 138..182
FT /note="Kelch 1"
FT REPEAT 184..229
FT /note="Kelch 2"
FT REPEAT 248..294
FT /note="Kelch 3"
FT REPEAT 296..340
FT /note="Kelch 4"
SQ SEQUENCE 403 AA; 46446 MW; 6B3B790E665A9E42 CRC64;
MLLPFPATMI SEVEQPKEKR SLSSEPPSLM SLPYEIIENI LARISKWSYP NLSLVSKSFL
SLLSSPQLYK TRSEIGTTEP CLYFCLESAN HSSPQWYTLW MKPDETLTGT GTIHDYSLIP
LPSSSPVLRT STVAVGSEIY VIGGHFNRSS SVRIFDCRSN TWRDGPNMTV ARSDPVAVLI
DQRIYVLGGR EMDESDDWFE VFDIKTQTWR ALPSFRAGLE LRRYIVWPNR YFPRLGDSQT
AVRLINVNPN ALEGKLYVAA QINDYTYEPK DDTWKVVSKS SIRRVKVWCV IENVMYACHD
VFLRWYDYED RRWREIQGLE ELCYHPTRGF SGAERIVNYG GKLVVMWRPV QSDGKDKIEI
WCAQIALEKR SKDEIWGKIE WINSVLTVPK LCDLCYSCVV VSI