FLA17_ARATH
ID FLA17_ARATH Reviewed; 458 AA.
AC Q66GR0; Q9FNG9;
DT 17-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2004, sequence version 1.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=Fasciclin-like arabinogalactan protein 17;
DE Flags: Precursor;
GN Name=FLA17; OrderedLocusNames=At5g06390; ORFNames=MHF15.9;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9405937; DOI=10.1093/dnares/4.4.291;
RA Kotani H., Nakamura Y., Sato S., Kaneko T., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. II. Sequence
RT features of the regions of 1,044,062 bp covered by thirteen physically
RT assigned P1 clones.";
RL DNA Res. 4:291-300(1997).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Kim C.J., Chen H., Cheuk R.F., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
RX PubMed=14645732; DOI=10.1104/pp.103.031237;
RA Johnson K.L., Jones B.J., Bacic A., Schultz C.J.;
RT "The fasciclin-like arabinogalactan proteins of Arabidopsis. A multigene
RT family of putative cell adhesion molecules.";
RL Plant Physiol. 133:1911-1925(2003).
CC -!- FUNCTION: May be a cell surface adhesion protein.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the fasciclin-like AGP family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB08961.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB006700; BAB08961.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED91009.1; -; Genomic_DNA.
DR EMBL; BT015342; AAU05465.1; -; mRNA.
DR EMBL; BT020253; AAV74247.1; -; mRNA.
DR RefSeq; NP_196257.2; NM_120722.4.
DR AlphaFoldDB; Q66GR0; -.
DR SMR; Q66GR0; -.
DR BioGRID; 15806; 1.
DR STRING; 3702.AT5G06390.1; -.
DR PaxDb; Q66GR0; -.
DR PRIDE; Q66GR0; -.
DR ProteomicsDB; 230429; -.
DR EnsemblPlants; AT5G06390.1; AT5G06390.1; AT5G06390.
DR GeneID; 830527; -.
DR Gramene; AT5G06390.1; AT5G06390.1; AT5G06390.
DR KEGG; ath:AT5G06390; -.
DR Araport; AT5G06390; -.
DR TAIR; locus:2164290; AT5G06390.
DR eggNOG; KOG1437; Eukaryota.
DR HOGENOM; CLU_047484_0_0_1; -.
DR InParanoid; Q66GR0; -.
DR OMA; SEQWPKE; -.
DR OrthoDB; 984651at2759; -.
DR PhylomeDB; Q66GR0; -.
DR PRO; PR:Q66GR0; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q66GR0; baseline and differential.
DR GO; GO:0031225; C:anchored component of membrane; IEA:UniProt.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0000325; C:plant-type vacuole; HDA:TAIR.
DR Gene3D; 2.30.180.10; -; 2.
DR InterPro; IPR036378; FAS1_dom_sf.
DR InterPro; IPR000782; FAS1_domain.
DR InterPro; IPR044654; FLA15/16/17/18.
DR PANTHER; PTHR32499; PTHR32499; 1.
DR Pfam; PF02469; Fasciclin; 2.
DR SMART; SM00554; FAS1; 2.
DR SUPFAM; SSF82153; SSF82153; 2.
DR PROSITE; PS50213; FAS1; 2.
PE 2: Evidence at transcript level;
KW Glycoprotein; Proteoglycan; Reference proteome; Repeat; Secreted; Signal.
FT SIGNAL 1..30
FT /evidence="ECO:0000255"
FT CHAIN 31..458
FT /note="Fasciclin-like arabinogalactan protein 17"
FT /id="PRO_0000253877"
FT DOMAIN 43..184
FT /note="FAS1 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00082"
FT DOMAIN 268..411
FT /note="FAS1 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00082"
FT REGION 207..262
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 80
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 290
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 458 AA; 50409 MW; 19CAF5D4DF816B01 CRC64;
MDRRIYGGSA VIHLFLFFSV LIFSAASALS KNQSPSSGSG QINSNSVLVA LLDSRYTELA
ELVEKALLLQ TLEDAVGRHN ITIFAPRNEA LERDLDPEFK RFLLEPGNLK SLQTLLMFHI
IPNRVGSNQW PSEESGRVKH HTLGNDQVRL SNGQGKKMVD LAEIIRPDDL TRPDGLIHGI
ERLLIPRSVQ EDFNRRRSLQ SISAVLPEGA PEVDPRTNRL KKPAAPVPAG SPPALPIQSA
MAPGPSLAPA PAPGPGGKQH HFDGEAQVKD FIHTLLHYGG YNEMADILVN LTSLATEMGR
LVSEGYVLTV LAPNDEAMAK LTTDQLSEPG APEQIVYYHI IPEYQTEESM YNSVRRFGKV
KFDTLRFPHK VAAKEADGSV KFGDGEKSAY LFDPDIYTDG RISVQGIDGV LFPQEEEVVE
SVKKPVKKIV QPRRGKLLEV ACSMLGAFGK DTYLSKCR