FLA20_ARATH
ID FLA20_ARATH Reviewed; 424 AA.
AC Q9FGW0;
DT 17-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=Putative fasciclin-like arabinogalactan protein 20;
GN Name=FLA20; OrderedLocusNames=At5g40940; ORFNames=MMG1.3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
RX PubMed=14645732; DOI=10.1104/pp.103.031237;
RA Johnson K.L., Jones B.J., Bacic A., Schultz C.J.;
RT "The fasciclin-like arabinogalactan proteins of Arabidopsis. A multigene
RT family of putative cell adhesion molecules.";
RL Plant Physiol. 133:1911-1925(2003).
CC -!- FUNCTION: May be a cell surface adhesion protein.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the fasciclin-like AGP family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AB023040; BAB10524.1; -; Genomic_DNA.
DR EMBL; CP002688; AED94617.1; -; Genomic_DNA.
DR RefSeq; NP_198910.1; NM_123459.2.
DR AlphaFoldDB; Q9FGW0; -.
DR SMR; Q9FGW0; -.
DR STRING; 3702.AT5G40940.1; -.
DR PaxDb; Q9FGW0; -.
DR PRIDE; Q9FGW0; -.
DR ProteomicsDB; 230516; -.
DR EnsemblPlants; AT5G40940.1; AT5G40940.1; AT5G40940.
DR GeneID; 834095; -.
DR Gramene; AT5G40940.1; AT5G40940.1; AT5G40940.
DR KEGG; ath:AT5G40940; -.
DR Araport; AT5G40940; -.
DR TAIR; locus:2167742; AT5G40940.
DR eggNOG; ENOG502RIKK; Eukaryota.
DR HOGENOM; CLU_817286_0_0_1; -.
DR InParanoid; Q9FGW0; -.
DR OMA; NMYYSDS; -.
DR OrthoDB; 984651at2759; -.
DR PhylomeDB; Q9FGW0; -.
DR PRO; PR:Q9FGW0; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FGW0; baseline and differential.
DR Genevisible; Q9FGW0; AT.
DR GO; GO:0031225; C:anchored component of membrane; IEA:UniProt.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR Gene3D; 2.30.180.10; -; 2.
DR InterPro; IPR036378; FAS1_dom_sf.
DR InterPro; IPR000782; FAS1_domain.
DR SMART; SM00554; FAS1; 2.
DR SUPFAM; SSF82153; SSF82153; 2.
DR PROSITE; PS50213; FAS1; 1.
PE 3: Inferred from homology;
KW Glycoprotein; Membrane; Proteoglycan; Reference proteome; Repeat;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..424
FT /note="Putative fasciclin-like arabinogalactan protein 20"
FT /id="PRO_0000253880"
FT TRANSMEM 46..66
FT /note="Helical"
FT /evidence="ECO:0000255"
FT DOMAIN 56..194
FT /note="FAS1 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00082"
FT DOMAIN 250..384
FT /note="FAS1 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00082"
FT REGION 199..246
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 405..424
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 153
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 160
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 246
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 283
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 287
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 424 AA; 46601 MW; 7308966A8E717024 CRC64;
MNKKPSKYFP SLNRTDYKNC NFLCNGFSLK PNEKKSSKNA SMASKLLTTF FLIFFVLDID
LVATSMTSVS SAVEVLSDSG YLSMGLTLKL ANQDLNLEDW QELTLFAPSD QSFSKFGQPS
LLDMKYQLSP TRLPGETLRN LPNGAKIPTL RSNYSLTVTN SSRFGGKTSI NNVVVQDSPV
FDDGYVVIYG SDEFFTSPTK ISDDSSSSSS IPSTTSSTGS IPIPSSATQT PPSPNIASDS
TRNLPNRSKP VNRFNIFESA SRLLMSRGFV IIATFLALQL EDNTSGNDTK ITVFAPIDEA
IPNPTTKFSD YVTIFRGHVV SQLLLWKDLQ KFAKEGSILQ TVLKGYEIEI SLSGDILLLN
GVPLIYPDLY VNDWIAVHGF NQMIVTKEKQ VDVGDSITVL NNGEQEEEGV HGEYSSELGD
YGLH