FLA3_ARATH
ID FLA3_ARATH Reviewed; 280 AA.
AC Q9ZQ23;
DT 17-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1999, sequence version 1.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=Fasciclin-like arabinogalactan protein 3;
DE Flags: Precursor;
GN Name=FLA3; OrderedLocusNames=At2g24450; ORFNames=T28I24.18;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Shinn P., Chen H., Cheuk R.F., Kim C.J., Ecker J.R.;
RT "Arabidopsis cDNA clones.";
RL Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
RX PubMed=14645732; DOI=10.1104/pp.103.031237;
RA Johnson K.L., Jones B.J., Bacic A., Schultz C.J.;
RT "The fasciclin-like arabinogalactan proteins of Arabidopsis. A multigene
RT family of putative cell adhesion molecules.";
RL Plant Physiol. 133:1911-1925(2003).
CC -!- FUNCTION: May be a cell surface adhesion protein.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Lipid-anchor, GPI-
CC anchor {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the fasciclin-like AGP family. {ECO:0000305}.
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DR EMBL; AC006403; AAD18116.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC07579.1; -; Genomic_DNA.
DR EMBL; BT012135; AAS76230.1; -; mRNA.
DR EMBL; BT012411; AAS92327.1; -; mRNA.
DR EMBL; AK228445; BAF00374.1; -; mRNA.
DR EMBL; AK229668; BAF01512.1; -; mRNA.
DR PIR; G84636; G84636.
DR RefSeq; NP_180021.1; NM_128006.5.
DR AlphaFoldDB; Q9ZQ23; -.
DR SMR; Q9ZQ23; -.
DR STRING; 3702.AT2G24450.1; -.
DR PaxDb; Q9ZQ23; -.
DR PRIDE; Q9ZQ23; -.
DR ProteomicsDB; 230949; -.
DR EnsemblPlants; AT2G24450.1; AT2G24450.1; AT2G24450.
DR GeneID; 816981; -.
DR Gramene; AT2G24450.1; AT2G24450.1; AT2G24450.
DR KEGG; ath:AT2G24450; -.
DR Araport; AT2G24450; -.
DR TAIR; locus:2061107; AT2G24450.
DR eggNOG; ENOG502RZZR; Eukaryota.
DR HOGENOM; CLU_058119_0_0_1; -.
DR InParanoid; Q9ZQ23; -.
DR OMA; KNVLMNH; -.
DR OrthoDB; 1506183at2759; -.
DR PhylomeDB; Q9ZQ23; -.
DR PRO; PR:Q9ZQ23; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9ZQ23; differential.
DR Genevisible; Q9ZQ23; AT.
DR GO; GO:0031225; C:anchored component of membrane; TAS:TAIR.
DR GO; GO:0046658; C:anchored component of plasma membrane; IBA:GO_Central.
DR Gene3D; 2.30.180.10; -; 1.
DR InterPro; IPR036378; FAS1_dom_sf.
DR InterPro; IPR000782; FAS1_domain.
DR InterPro; IPR033254; Plant_FLA.
DR PANTHER; PTHR32382; PTHR32382; 1.
DR Pfam; PF02469; Fasciclin; 1.
DR SUPFAM; SSF82153; SSF82153; 1.
DR PROSITE; PS50213; FAS1; 1.
PE 2: Evidence at transcript level;
KW Cell membrane; Glycoprotein; GPI-anchor; Lipoprotein; Membrane;
KW Proteoglycan; Reference proteome; Signal.
FT SIGNAL 1..24
FT /evidence="ECO:0000255"
FT CHAIN 25..256
FT /note="Fasciclin-like arabinogalactan protein 3"
FT /id="PRO_0000253863"
FT PROPEP 257..280
FT /note="Removed in mature form"
FT /evidence="ECO:0000255"
FT /id="PRO_0000253864"
FT DOMAIN 25..169
FT /note="FAS1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00082"
FT REGION 180..262
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 180..199
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT LIPID 256
FT /note="GPI-anchor amidated serine"
FT /evidence="ECO:0000255"
FT CARBOHYD 26
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 126
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 159
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 280 AA; 29170 MW; 9E0443D6C4051449 CRC64;
MGLKVSSSLL CLTILLAVSS IVSAVNITRV LEKYPEFSTM TELLAKTELT PIINKRQTIT
VLALNNDAIG SISGRPEEEV KNILMNHVVL DYFDELKLKA LKEKSTLLTT LYQSTGLGQQ
QNGFLNCTKS NGKIYFGSGV KGAPQTAEYI TTVFRNPYNL SVVQISMPIV APGLGSPVKV
PPPPPMSSPP APSPKKGAAT PAPAPADEGD YADAPPGLAP ETAPASAPSE SDSPAPAPDK
SGKKKMAAAD EAEPPSSASN TGLSFGAVLV LGFVASFVGF
