FLAV_RHOCB
ID FLAV_RHOCB Reviewed; 182 AA.
AC P52967; D5AT59;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 28-JUN-2011, sequence version 3.
DT 25-MAY-2022, entry version 102.
DE RecName: Full=Flavodoxin;
GN Name=nifF; Synonyms=fldA; OrderedLocusNames=RCAP_rcc01421;
OS Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC Rhodobacteraceae; Rhodobacter.
OX NCBI_TaxID=272942;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC BAA-309 / NBRC 16581 / SB1003;
RX PubMed=8682802; DOI=10.1128/jb.178.13.3949-3952.1996;
RA Gennaro G., Huebner P., Sandmeier U., Yakunin A.F., Hallenbeck P.C.;
RT "Cloning, characterization, and regulation of nifF from Rhodobacter
RT capsulatus.";
RL J. Bacteriol. 178:3949-3952(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-309 / NBRC 16581 / SB1003;
RX PubMed=20418398; DOI=10.1128/jb.00366-10;
RA Strnad H., Lapidus A., Paces J., Ulbrich P., Vlcek C., Paces V.,
RA Haselkorn R.;
RT "Complete genome sequence of the photosynthetic purple nonsulfur bacterium
RT Rhodobacter capsulatus SB 1003.";
RL J. Bacteriol. 192:3545-3546(2010).
CC -!- FUNCTION: Low-potential electron donor to a number of redox enzymes.
CC NifF is the electron donor to nitrogenase.
CC -!- COFACTOR:
CC Name=FMN; Xref=ChEBI:CHEBI:58210;
CC -!- SIMILARITY: Belongs to the flavodoxin family. {ECO:0000305}.
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DR EMBL; L42290; AAC05792.1; -; Genomic_DNA.
DR EMBL; CP001312; ADE85166.1; -; Genomic_DNA.
DR RefSeq; WP_013067145.1; NC_014034.1.
DR PDB; 2WC1; X-ray; 2.17 A; A=1-182.
DR PDBsum; 2WC1; -.
DR AlphaFoldDB; P52967; -.
DR SMR; P52967; -.
DR STRING; 272942.RCAP_rcc01421; -.
DR EnsemblBacteria; ADE85166; ADE85166; RCAP_rcc01421.
DR GeneID; 31490307; -.
DR KEGG; rcp:RCAP_rcc01421; -.
DR eggNOG; COG0716; Bacteria.
DR HOGENOM; CLU_051402_1_0_5; -.
DR OMA; CENESWE; -.
DR OrthoDB; 1961680at2; -.
DR EvolutionaryTrace; P52967; -.
DR Proteomes; UP000002361; Chromosome.
DR GO; GO:0009055; F:electron transfer activity; IEA:InterPro.
DR GO; GO:0010181; F:FMN binding; IEA:InterPro.
DR GO; GO:0009399; P:nitrogen fixation; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.360; -; 1.
DR InterPro; IPR001094; Flavdoxin-like.
DR InterPro; IPR008254; Flavodoxin/NO_synth.
DR InterPro; IPR001226; Flavodoxin_CS.
DR InterPro; IPR010086; Flavodoxin_lc.
DR InterPro; IPR029039; Flavoprotein-like_sf.
DR Pfam; PF00258; Flavodoxin_1; 1.
DR PIRSF; PIRSF038996; FldA; 1.
DR PRINTS; PR00369; FLAVODOXIN.
DR SUPFAM; SSF52218; SSF52218; 1.
DR TIGRFAMs; TIGR01752; flav_long; 1.
DR PROSITE; PS00201; FLAVODOXIN; 1.
DR PROSITE; PS50902; FLAVODOXIN_LIKE; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Electron transport; Flavoprotein; FMN; Nitrogen fixation;
KW Reference proteome; Transport.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250"
FT CHAIN 2..182
FT /note="Flavodoxin"
FT /id="PRO_0000171641"
FT DOMAIN 4..173
FT /note="Flavodoxin-like"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00088"
FT CONFLICT 124..125
FT /note="KL -> NV (in Ref. 1; AAC05792)"
FT /evidence="ECO:0000305"
FT STRAND 3..8
FT /evidence="ECO:0007829|PDB:2WC1"
FT STRAND 11..13
FT /evidence="ECO:0007829|PDB:2WC1"
FT HELIX 14..23
FT /evidence="ECO:0007829|PDB:2WC1"
FT TURN 28..30
FT /evidence="ECO:0007829|PDB:2WC1"
FT HELIX 37..39
FT /evidence="ECO:0007829|PDB:2WC1"
FT HELIX 42..47
FT /evidence="ECO:0007829|PDB:2WC1"
FT STRAND 49..56
FT /evidence="ECO:0007829|PDB:2WC1"
FT TURN 59..61
FT /evidence="ECO:0007829|PDB:2WC1"
FT HELIX 66..68
FT /evidence="ECO:0007829|PDB:2WC1"
FT HELIX 75..78
FT /evidence="ECO:0007829|PDB:2WC1"
FT HELIX 79..82
FT /evidence="ECO:0007829|PDB:2WC1"
FT STRAND 91..97
FT /evidence="ECO:0007829|PDB:2WC1"
FT TURN 100..102
FT /evidence="ECO:0007829|PDB:2WC1"
FT TURN 107..109
FT /evidence="ECO:0007829|PDB:2WC1"
FT HELIX 110..119
FT /evidence="ECO:0007829|PDB:2WC1"
FT TURN 120..122
FT /evidence="ECO:0007829|PDB:2WC1"
FT STRAND 124..126
FT /evidence="ECO:0007829|PDB:2WC1"
FT STRAND 146..152
FT /evidence="ECO:0007829|PDB:2WC1"
FT TURN 154..156
FT /evidence="ECO:0007829|PDB:2WC1"
FT HELIX 158..160
FT /evidence="ECO:0007829|PDB:2WC1"
FT HELIX 161..171
FT /evidence="ECO:0007829|PDB:2WC1"
FT HELIX 173..176
FT /evidence="ECO:0007829|PDB:2WC1"
SQ SEQUENCE 182 AA; 19848 MW; 955F326BBF27213E CRC64;
MAKIGLFFGS DTGTTRKIAK QIKDMFDDEV MAKPLNVNRA DVADFMAYDF LILGTPTLGD
GQLPGLSANA ASESWEEFLP RIADQDFSGK TIALFGLGDQ VTYPLEFVNA LFFLHEFFSD
RGAKLVGRWP AKGYGFEDSL AVVEGEFLGL ALDQDNQAAL TPERLKGWLS LIAADFGLVL
PA