FLP4_ORYSJ
ID FLP4_ORYSJ Reviewed; 118 AA.
AC Q0JEF5; A0A0P0W8G5; Q7XX25;
DT 16-MAY-2012, integrated into UniProtKB/Swiss-Prot.
DT 03-OCT-2006, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=Flowering-promoting factor 1-like protein 4;
DE AltName: Full=FPF1-like protein 4;
GN OrderedLocusNames=Os04g0282400, LOC_Os04g21350;
GN ORFNames=OsJ_14120, OSJNBa0071G03.4;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447439; DOI=10.1038/nature01183;
RA Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA Li J., Hong G., Xue Y., Han B.;
RT "Sequence and analysis of rice chromosome 4.";
RL Nature 420:316-320(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- SIMILARITY: Belongs to the FPF1 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAD39791.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=EAZ30060.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AL662975; CAD39791.2; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008210; BAF14282.1; -; Genomic_DNA.
DR EMBL; AP014960; BAS88379.1; -; Genomic_DNA.
DR EMBL; CM000141; EAZ30060.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AK120187; BAG99910.1; -; mRNA.
DR RefSeq; XP_015634517.1; XM_015779031.1.
DR AlphaFoldDB; Q0JEF5; -.
DR SMR; Q0JEF5; -.
DR STRING; 4530.OS04T0282400-01; -.
DR PaxDb; Q0JEF5; -.
DR PRIDE; Q0JEF5; -.
DR EnsemblPlants; Os04t0282400-01; Os04t0282400-01; Os04g0282400.
DR GeneID; 4335374; -.
DR Gramene; Os04t0282400-01; Os04t0282400-01; Os04g0282400.
DR KEGG; osa:4335374; -.
DR eggNOG; ENOG502S12G; Eukaryota.
DR HOGENOM; CLU_121629_0_1_1; -.
DR InParanoid; Q0JEF5; -.
DR OMA; TKYYQST; -.
DR OrthoDB; 1536466at2759; -.
DR Proteomes; UP000000763; Chromosome 4.
DR Proteomes; UP000007752; Chromosome 4.
DR Proteomes; UP000059680; Chromosome 4.
DR Genevisible; Q0JEF5; OS.
DR GO; GO:0009909; P:regulation of flower development; IEA:InterPro.
DR InterPro; IPR039274; FPF1.
DR PANTHER; PTHR33433; PTHR33433; 1.
PE 3: Inferred from homology;
KW Reference proteome.
FT CHAIN 1..118
FT /note="Flowering-promoting factor 1-like protein 4"
FT /id="PRO_0000417319"
SQ SEQUENCE 118 AA; 13149 MW; 8E7B305488615F1E CRC64;
MAGVWVFEDG MVRRADSEAP SRGRGVGGGG GGGKVLVHVP SSEVVTSYEV LERRLRELGW
ERYLNDPCLL QFHQRSTVHL ISVPRDFSRL KLVHMYDVVV KTRNVFEVRD AATTASPP
