FL_ORYSI
ID FL_ORYSI Reviewed; 389 AA.
AC A2XX39; O24175; Q7XNU1; Q9S9R2;
DT 10-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT 10-JUL-2007, sequence version 2.
DT 25-MAY-2022, entry version 70.
DE RecName: Full=Probable transcription factor FL;
DE Short=RFL;
GN Name=OSL; Synonyms=FL; ORFNames=OsI_016632;
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. IR64;
RA Kushalappa M.K., Vijayraghavan U.;
RT "Oryza sativa floral meristem identity protein (OSL) gene.";
RL Submitted (OCT-1999) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
CC -!- FUNCTION: Probable transcription factor. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the FLO/LFY family. {ECO:0000305}.
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DR EMBL; AF065992; AAC96098.2; -; Genomic_DNA.
DR EMBL; CM000129; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; A2XX39; -.
DR SMR; A2XX39; -.
DR STRING; 39946.A2XX39; -.
DR EnsemblPlants; BGIOSGA014428-TA; BGIOSGA014428-PA; BGIOSGA014428.
DR Gramene; BGIOSGA014428-TA; BGIOSGA014428-PA; BGIOSGA014428.
DR HOGENOM; CLU_060646_0_0_1; -.
DR OMA; IFNTHPR; -.
DR Proteomes; UP000007015; Chromosome 4.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR Gene3D; 1.10.4180.10; -; 1.
DR InterPro; IPR035209; FLO/LFY_C.
DR InterPro; IPR002910; FLO_LFY.
DR InterPro; IPR038276; Floricaula/leafy_C_sf.
DR InterPro; IPR035079; LFY_SAM.
DR PANTHER; PTHR36079; PTHR36079; 1.
DR Pfam; PF17538; C_LFY_FLO; 1.
DR Pfam; PF01698; SAM_LFY; 1.
PE 3: Inferred from homology;
KW Activator; Developmental protein; DNA-binding; Nucleus; Reference proteome;
KW Transcription; Transcription regulation.
FT CHAIN 1..389
FT /note="Probable transcription factor FL"
FT /id="PRO_0000295024"
FT DNA_BIND 221..225
FT /evidence="ECO:0000250"
FT DNA_BIND 290..297
FT /evidence="ECO:0000250"
FT DNA_BIND 361..364
FT /evidence="ECO:0000250"
FT REGION 1..41
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 141..226
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 17..41
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 161..180
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT SITE 268
FT /note="Interaction with DNA"
FT /evidence="ECO:0000250"
FT SITE 275
FT /note="Interaction with DNA"
FT /evidence="ECO:0000250"
FT SITE 279
FT /note="Interaction with DNA"
FT /evidence="ECO:0000250"
FT SITE 326
FT /note="Interaction with DNA"
FT /evidence="ECO:0000250"
SQ SEQUENCE 389 AA; 42544 MW; 5132AA2F34B0863A CRC64;
MDPNDAFSAA HPFRWDLGPP APAPVPPPPP PPPPPPPANV PRELEELVAG YGVRMSTVAR
ISELGFTAST LLAMTERELD DMMAALAGLF RWDLLLGERF GLRAALRAER GRLMSLGGRH
HGHQSGSTVD GASQEVLSEE HDMAGSGGMG DDDNGRRMVT GKKQAKKGSA ARKGKKARRK
KVDDLRLDMQ EDEMDCCDED GGGGSESTES SAGGGGGERQ REHPFVVTEP GEVARAKKNG
LDYLFHLYEQ CRLFLLQVQS MAKLHGHKSP TKVTNQVFRY AKKVGASYIN KPKMRHYVHC
YALHCLDEEA SDALRRAYKA RGENVGAWRQ ACYAPLVDIS ARHGFDIDAV FAAHPRLAIW
YVPTRLRQLC HQARSSHAAA AAALPPPLF