ALBA_METTH
ID ALBA_METTH Reviewed; 91 AA.
AC O27527;
DT 09-SEP-2003, integrated into UniProtKB/Swiss-Prot.
DT 13-APR-2004, sequence version 2.
DT 25-MAY-2022, entry version 119.
DE RecName: Full=DNA/RNA-binding protein Alba {ECO:0000255|HAMAP-Rule:MF_01122};
GN Name=albA {ECO:0000255|HAMAP-Rule:MF_01122}; OrderedLocusNames=MTH_1483;
OS Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
OS 10044 / NBRC 100330 / Delta H) (Methanobacterium thermoautotrophicum).
OC Archaea; Euryarchaeota; Methanomada group; Methanobacteria;
OC Methanobacteriales; Methanobacteriaceae; Methanothermobacter.
OX NCBI_TaxID=187420;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H;
RX PubMed=9371463; DOI=10.1128/jb.179.22.7135-7155.1997;
RA Smith D.R., Doucette-Stamm L.A., Deloughery C., Lee H.-M., Dubois J.,
RA Aldredge T., Bashirzadeh R., Blakely D., Cook R., Gilbert K., Harrison D.,
RA Hoang L., Keagle P., Lumm W., Pothier B., Qiu D., Spadafora R., Vicare R.,
RA Wang Y., Wierzbowski J., Gibson R., Jiwani N., Caruso A., Bush D.,
RA Safer H., Patwell D., Prabhakar S., McDougall S., Shimer G., Goyal A.,
RA Pietrovski S., Church G.M., Daniels C.J., Mao J.-I., Rice P., Noelling J.,
RA Reeve J.N.;
RT "Complete genome sequence of Methanobacterium thermoautotrophicum deltaH:
RT functional analysis and comparative genomics.";
RL J. Bacteriol. 179:7135-7155(1997).
CC -!- FUNCTION: Binds double-stranded DNA tightly but without sequence
CC specificity. It is distributed uniformly and abundantly on the
CC chromosome, suggesting a role in chromatin architecture. However, it
CC does not significantly compact DNA. Binds rRNA and mRNA in vivo. May
CC play a role in maintaining the structural and functional stability of
CC RNA, and, perhaps, ribosomes. {ECO:0000255|HAMAP-Rule:MF_01122}.
CC -!- SUBUNIT: Homotetramer. {ECO:0000255|HAMAP-Rule:MF_01122}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01122}.
CC Chromosome {ECO:0000255|HAMAP-Rule:MF_01122}.
CC -!- PTM: Acetylated. Deacetylation by the SIR2-homolog deacetylase may
CC regulate its activity. {ECO:0000255|HAMAP-Rule:MF_01122}.
CC -!- SIMILARITY: Belongs to the histone-like Alba family.
CC {ECO:0000255|HAMAP-Rule:MF_01122}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAB85958.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AE000666; AAB85958.1; ALT_INIT; Genomic_DNA.
DR PIR; F69064; F69064.
DR RefSeq; WP_048061063.1; NC_000916.1.
DR PDB; 3TOE; X-ray; 2.20 A; A/B=1-91.
DR PDBsum; 3TOE; -.
DR AlphaFoldDB; O27527; -.
DR SMR; O27527; -.
DR STRING; 187420.MTH_1483; -.
DR EnsemblBacteria; AAB85958; AAB85958; MTH_1483.
DR GeneID; 1471752; -.
DR KEGG; mth:MTH_1483; -.
DR PATRIC; fig|187420.15.peg.1445; -.
DR HOGENOM; CLU_110989_1_0_2; -.
DR OMA; QFNEGAK; -.
DR Proteomes; UP000005223; Chromosome.
DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003690; F:double-stranded DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.110.20; -; 1.
DR HAMAP; MF_01122; AlbA; 1.
DR InterPro; IPR036882; Alba-like_dom_sf.
DR InterPro; IPR013795; DNA/RNA-bd_Alba.
DR InterPro; IPR002775; DNA/RNA-bd_Alba-like.
DR Pfam; PF01918; Alba; 1.
DR PIRSF; PIRSF028732; Alba; 1.
DR SUPFAM; SSF82704; SSF82704; 1.
DR TIGRFAMs; TIGR00285; TIGR00285; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Acetylation; Chromosome; Cytoplasm; DNA-binding;
KW Reference proteome; RNA-binding.
FT CHAIN 1..91
FT /note="DNA/RNA-binding protein Alba"
FT /id="PRO_0000151702"
FT MOD_RES 12
FT /note="N6-acetyllysine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01122"
FT HELIX 14..26
FT /evidence="ECO:0007829|PDB:3TOE"
FT STRAND 31..37
FT /evidence="ECO:0007829|PDB:3TOE"
FT HELIX 40..54
FT /evidence="ECO:0007829|PDB:3TOE"
FT STRAND 60..72
FT /evidence="ECO:0007829|PDB:3TOE"
FT STRAND 76..89
FT /evidence="ECO:0007829|PDB:3TOE"
SQ SEQUENCE 91 AA; 9975 MW; 0ED292A9463784F6 CRC64;
MSEENVVYIG NKPVMNYVLA VVTQMNGGTS EVILKARGIA ISRAVDVAEI VRNRFIPDIQ
IENIDICTEE IIGNEGTATN VSAIEIQLRK D