ALBA_PYRHO
ID ALBA_PYRHO Reviewed; 93 AA.
AC O74101;
DT 09-SEP-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1998, sequence version 1.
DT 25-MAY-2022, entry version 109.
DE RecName: Full=DNA/RNA-binding protein Alba {ECO:0000255|HAMAP-Rule:MF_01122};
GN Name=albA {ECO:0000255|HAMAP-Rule:MF_01122}; OrderedLocusNames=PH1839.1;
GN ORFNames=PHS053;
OS Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC
OS 100139 / OT-3).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Pyrococcus.
OX NCBI_TaxID=70601;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3;
RX PubMed=9679194; DOI=10.1093/dnares/5.2.55;
RA Kawarabayasi Y., Sawada M., Horikawa H., Haikawa Y., Hino Y., Yamamoto S.,
RA Sekine M., Baba S., Kosugi H., Hosoyama A., Nagai Y., Sakai M., Ogura K.,
RA Otsuka R., Nakazawa H., Takamiya M., Ohfuku Y., Funahashi T., Tanaka T.,
RA Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Yoshizawa T.,
RA Nakamura Y., Robb F.T., Horikoshi K., Masuchi Y., Shizuya H., Kikuchi H.;
RT "Complete sequence and gene organization of the genome of a hyper-
RT thermophilic archaebacterium, Pyrococcus horikoshii OT3.";
RL DNA Res. 5:55-76(1998).
CC -!- FUNCTION: Binds double-stranded DNA tightly but without sequence
CC specificity. It is distributed uniformly and abundantly on the
CC chromosome, suggesting a role in chromatin architecture. However, it
CC does not significantly compact DNA. Binds rRNA and mRNA in vivo. May
CC play a role in maintaining the structural and functional stability of
CC RNA, and, perhaps, ribosomes. {ECO:0000255|HAMAP-Rule:MF_01122}.
CC -!- SUBUNIT: Homotetramer. {ECO:0000255|HAMAP-Rule:MF_01122}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01122}.
CC Chromosome {ECO:0000255|HAMAP-Rule:MF_01122}.
CC -!- PTM: Acetylated. Deacetylation by the SIR2-homolog deacetylase may
CC regulate its activity. {ECO:0000255|HAMAP-Rule:MF_01122}.
CC -!- SIMILARITY: Belongs to the histone-like Alba family.
CC {ECO:0000255|HAMAP-Rule:MF_01122}.
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DR EMBL; BA000001; BAA30960.1; -; Genomic_DNA.
DR PIR; A71196; A71196.
DR RefSeq; WP_010885899.1; NC_000961.1.
DR PDB; 2Z7C; X-ray; 2.80 A; A/B/C/D=1-93.
DR PDBsum; 2Z7C; -.
DR AlphaFoldDB; O74101; -.
DR SMR; O74101; -.
DR MINT; O74101; -.
DR STRING; 70601.3258277; -.
DR EnsemblBacteria; BAA30960; BAA30960; BAA30960.
DR GeneID; 1442681; -.
DR KEGG; pho:PHS053; -.
DR eggNOG; arCOG01753; Archaea.
DR OMA; QFNEGAK; -.
DR OrthoDB; 111461at2157; -.
DR EvolutionaryTrace; O74101; -.
DR Proteomes; UP000000752; Chromosome.
DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003690; F:double-stranded DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.110.20; -; 1.
DR HAMAP; MF_01122; AlbA; 1.
DR InterPro; IPR036882; Alba-like_dom_sf.
DR InterPro; IPR013795; DNA/RNA-bd_Alba.
DR InterPro; IPR002775; DNA/RNA-bd_Alba-like.
DR Pfam; PF01918; Alba; 1.
DR PIRSF; PIRSF028732; Alba; 1.
DR SUPFAM; SSF82704; SSF82704; 1.
DR TIGRFAMs; TIGR00285; TIGR00285; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Acetylation; Chromosome; Cytoplasm; DNA-binding; RNA-binding.
FT CHAIN 1..93
FT /note="DNA/RNA-binding protein Alba"
FT /id="PRO_0000151707"
FT MOD_RES 12
FT /note="N6-acetyllysine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01122"
FT STRAND 6..8
FT /evidence="ECO:0007829|PDB:2Z7C"
FT HELIX 14..26
FT /evidence="ECO:0007829|PDB:2Z7C"
FT STRAND 30..37
FT /evidence="ECO:0007829|PDB:2Z7C"
FT HELIX 40..54
FT /evidence="ECO:0007829|PDB:2Z7C"
FT STRAND 61..73
FT /evidence="ECO:0007829|PDB:2Z7C"
FT STRAND 79..90
FT /evidence="ECO:0007829|PDB:2Z7C"
SQ SEQUENCE 93 AA; 10382 MW; D15D47A30C1566BD CRC64;
MTEEHVVYIG KKPVMNYVLA VITQFHEGAK EVSIKARGRA ISRAVDVAEI VRNRFLKDDV
DVKEIKIGTE ELPTADGRTT NTSTIEIVLA RKT