FORF_DICDI
ID FORF_DICDI Reviewed; 1220 AA.
AC Q5TJ56; Q54H12;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 21-DEC-2004, sequence version 1.
DT 25-MAY-2022, entry version 100.
DE RecName: Full=Formin-F;
DE AltName: Full=Diaphanous-related formin dia1;
GN Name=forF; Synonyms=drf1; ORFNames=DDB_G0289763;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=AX2;
RX PubMed=15507682; DOI=10.1093/nar/gnh136;
RA Faix J., Kreppel L., Shaulsky G., Schleicher M., Kimmel A.R.;
RT "A rapid and efficient method to generate multiple gene disruptions in
RT Dictyostelium discoideum using a single selectable marker and the Cre-loxP
RT system.";
RL Nucleic Acids Res. 32:E143-E143(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
RN [3]
RP NOMENCLATURE.
RX PubMed=15726806; DOI=10.1007/s00709-004-0058-2;
RA Cvrckova F., Rivero F., Bavlnka B.;
RT "Evolutionarily conserved modules in actin nucleation: lessons from
RT Dictyostelium discoideum and plants. Review article.";
RL Protoplasma 224:15-31(2004).
RN [4]
RP DEVELOPMENTAL STAGE.
RX PubMed=15740615; DOI=10.1186/1471-2164-6-28;
RA Rivero F., Muramoto T., Meyer A.-K., Urushihara H., Uyeda T.Q.P.,
RA Kitayama C.;
RT "A comparative sequence analysis reveals a common GBD/FH3-FH1-FH2-DAD
RT architecture in formins from Dictyostelium, fungi and metazoa.";
RL BMC Genomics 6:28-28(2005).
RN [5]
RP INTERACTION WITH RHO GTPASE.
RX PubMed=16762450; DOI=10.1016/j.ejcb.2006.04.011;
RA Vlahou G., Rivero F.;
RT "Rho GTPase signaling in Dictyostelium discoideum: insights from the
RT genome.";
RL Eur. J. Cell Biol. 85:947-959(2006).
CC -!- FUNCTION: Formins play an important role in the nucleation of actin and
CC the formation of linear actin filaments. {ECO:0000250}.
CC -!- SUBUNIT: Interacts (via GBD/FH3 domain) with activated Rho-GTPases.
CC {ECO:0000269|PubMed:16762450}.
CC -!- DEVELOPMENTAL STAGE: Expression gradually increased after the onset of
CC development. {ECO:0000269|PubMed:15740615}.
CC -!- DOMAIN: The DAD domain regulates activation via by an autoinhibitory
CC interaction with the GBD/FH3 domain. This autoinhibition is released
CC upon competitive binding of an activated GTPase. The release of DAD
CC allows the FH2 domain to then nucleate and elongate nonbranched actin
CC filaments (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the formin homology family. Diaphanous
CC subfamily. {ECO:0000305}.
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DR EMBL; AJ812237; CAH23234.1; -; mRNA.
DR EMBL; AAFI02000148; EAL62593.1; -; Genomic_DNA.
DR RefSeq; XP_636106.1; XM_631014.1.
DR AlphaFoldDB; Q5TJ56; -.
DR SMR; Q5TJ56; -.
DR STRING; 44689.DDB0231185; -.
DR PaxDb; Q5TJ56; -.
DR PRIDE; Q5TJ56; -.
DR EnsemblProtists; EAL62593; EAL62593; DDB_G0289763.
DR GeneID; 8627319; -.
DR KEGG; ddi:DDB_G0289763; -.
DR dictyBase; DDB_G0289763; forF.
DR eggNOG; KOG1924; Eukaryota.
DR HOGENOM; CLU_279717_0_0_1; -.
DR InParanoid; Q5TJ56; -.
DR OMA; KENHKER; -.
DR PhylomeDB; Q5TJ56; -.
DR PRO; PR:Q5TJ56; -.
DR Proteomes; UP000002195; Chromosome 5.
DR GO; GO:0015629; C:actin cytoskeleton; IDA:dictyBase.
DR GO; GO:0031143; C:pseudopodium; IDA:dictyBase.
DR GO; GO:0051015; F:actin filament binding; IBA:GO_Central.
DR GO; GO:0005522; F:profilin binding; IPI:dictyBase.
DR GO; GO:0031267; F:small GTPase binding; IEA:InterPro.
DR GO; GO:0070060; P:'de novo' actin filament nucleation; IDA:dictyBase.
DR GO; GO:0030041; P:actin filament polymerization; IDA:dictyBase.
DR GO; GO:0046956; P:positive phototaxis; IMP:dictyBase.
DR Gene3D; 1.20.58.2220; -; 1.
DR Gene3D; 1.25.10.10; -; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR015425; FH2_Formin.
DR InterPro; IPR042201; FH2_Formin_sf.
DR InterPro; IPR010472; FH3_dom.
DR InterPro; IPR027645; Formin_F/D.
DR InterPro; IPR014768; GBD/FH3_dom.
DR InterPro; IPR010473; GTPase-bd.
DR PANTHER; PTHR45725:SF11; PTHR45725:SF11; 3.
DR Pfam; PF06367; Drf_FH3; 1.
DR Pfam; PF06371; Drf_GBD; 1.
DR Pfam; PF02181; FH2; 1.
DR SMART; SM01139; Drf_FH3; 1.
DR SMART; SM01140; Drf_GBD; 1.
DR SMART; SM00498; FH2; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
DR PROSITE; PS51444; FH2; 1.
DR PROSITE; PS51232; GBD_FH3; 1.
PE 1: Evidence at protein level;
KW Actin-binding; Coiled coil; Reference proteome.
FT CHAIN 1..1220
FT /note="Formin-F"
FT /id="PRO_0000363918"
FT DOMAIN 6..373
FT /note="GBD/FH3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00579"
FT DOMAIN 532..655
FT /note="FH1"
FT DOMAIN 656..1054
FT /note="FH2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00774"
FT DOMAIN 1083..1158
FT /note="DAD"
FT REGION 1..62
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 461..659
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 711..732
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1049..1192
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 392..428
FT /evidence="ECO:0000255"
FT COILED 1032..1062
FT /evidence="ECO:0000255"
FT COMPBIAS 1..22
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 39..56
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 497..565
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 574..640
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1062..1085
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1096..1114
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1115..1149
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1151..1192
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1220 AA; 135806 MW; 3F2DAEA23D46036C CRC64;
MNRIFGRKKK DKDSDEKGST ESENDFLSSL PAKANKRYSM AYSSLQPDGN NSTNSKSADK
FDDKGKAVDT PEFFVNTINL LPNIEILAQL CSSLQSKPSA WSKSLIDCNG IEALLNVLAF
IERNGQKDSD VILQSLAVTC LLSLLNSKYG IEKAIATPNS MIRLITSMDT PKADTRSSVF
EILTAICMIS EKGYQLILEA MTHFKQVRKE RFRFTFLVES MKKVMNSSDK EYLTTCLTLV
NGIVNSSEEI DERIQLRTEF TRLGLDEVIS VNKNIPYEEA PDLLTQIDVY EDEQRADQEE
LSERFEDLDI DINDPQVIFN EIYKQAKDRL HHPLLAILQS LLSISSDTEV GMLSWFLIEK
LVLQISVNKP MIGDDDGKVS LEDLLASTAP SVALQSEFQK NIEELAKVKD QLKKANFDLN
IANQELSSRS HESSVLKSNM FNTVKQKDQE IIKLRGQMKR IDSNFFSPPG GDGDDHINVI
NTPEESSPHH ESPRKQQQQT SKPPLNPKSS KPPISSSQLK EKSKSNLSSS SSDSLSNDFK
SQVEVAQQQQ PQQQNIESTL TPEPTQIIKE EPIVTTPPPA PPAPPPPPMM GGGPPPPPPP
PMMGGGGPPP PPPPPMMGGG PPPPPPMGGK GGPPPPPGGG GFGLFNSNKP PANAPKFTVS
KPTTKVKQFQ WTKIPNKKLG ETIFTNLGTI KTDWLNVGEI ENLFFAPEAN SQKKLEASDK
KSTSSTKPGT VSVIDPKKSQ NLAIYLSKFK CPLEEIKTAL YTLDEDIFTM ESLKALEQYL
PTDEDMEAIK DYLKKDGELK MLTKAEHFLL EMDSVSSLAE RVKSFYLKIL FPDKLKEIKP
DLELFTKTIK DIKNSKNFLK VMEVVLIIGN FLNGGTARGD CFGFKLDALL KLADTKTANN
KSNLLVYIIS ELEQKFPDSL KFMDDLSGVQ ECVKISMNTI SADLNLLKKD LDAVNNGIGK
MKRSKEESYF FSTMDDFIKD ANIEIKIAFD QFQEAEKNFQ ELAVLFGEES KIPSEEFFVT
INRFIVMFDK CYKDFQRDKE AAERAIKRDE AKAKKAQQLK RMNGKIASST NNKNPLASSS
TSVGDGGMVE DIMQSVRDGD AFKQRRRLKG TKENTDDSSS ITTISEQSEN SNTSSITITT
PSGIELDITP SKSGSRREKK TSKSSDKDKE KEKEKEKQCE STESEDINKK DINVAAKALT
IVMRSKQTMH SRIDTFNFDA