FPF1_ARATH
ID FPF1_ARATH Reviewed; 110 AA.
AC O23624;
DT 16-MAY-2012, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1998, sequence version 1.
DT 03-AUG-2022, entry version 108.
DE RecName: Full=Flowering-promoting factor 1;
DE Short=AtFPF1;
GN Name=FPF1; OrderedLocusNames=At5g24860; ORFNames=F6A4, T4C12;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], DEVELOPMENTAL STAGE, AND FUNCTION.
RX PubMed=9286110; DOI=10.2307/3870385;
RA Kania T., Russenberger D., Peng S., Apel K., Melzer S.;
RT "FPF1 promotes flowering in Arabidopsis.";
RL Plant Cell 9:1327-1338(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Shinn P., Chen H., Kim C.J., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP FUNCTION.
RX PubMed=10406123; DOI=10.1046/j.1365-313x.1999.00461.x;
RA Melzer S., Kampmann G., Chandler J., Apel K.;
RT "FPF1 modulates the competence to flowering in Arabidopsis.";
RL Plant J. 18:395-405(1999).
RN [6]
RP GENE FAMILY, FUNCTION, AND TISSUE SPECIFICITY.
RA Borner R., Kampmann G., Apel K., Melzer S.;
RT "The FPF gene family and flowering time control in Arabidopsis.";
RL (In) Proceedings of the 11th international conference on Arabidopsis
RL research, abstract#308, Madison (2000).
CC -!- FUNCTION: Modulates the competence to flowering of apical meristems.
CC Involved in a GA-dependent response in apical meristems during the
CC transition to flowering. {ECO:0000269|PubMed:10406123,
CC ECO:0000269|PubMed:9286110, ECO:0000269|Ref.6}.
CC -!- INTERACTION:
CC O23624; Q5CCK4: VAL2; NbExp=3; IntAct=EBI-4476833, EBI-15193683;
CC -!- DEVELOPMENTAL STAGE: After the photoperiodic induction of flowering and
CC in early transition stages, expression is only detectable in the
CC peripheral zone of apical meristems. Later on, it can also be found in
CC floral meristems and in axillary meristems that form secondary
CC inflorescences. {ECO:0000269|PubMed:9286110}.
CC -!- MISCELLANEOUS: Overexpression of FPF1 results in shortening of the time
CC to flowering.
CC -!- SIMILARITY: Belongs to the FPF1 family. {ECO:0000305}.
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DR EMBL; AF069716; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AL392145; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002688; AED93370.1; -; Genomic_DNA.
DR EMBL; BT025027; ABE02402.1; -; mRNA.
DR EMBL; Y11988; CAA72717.1; -; mRNA.
DR RefSeq; NP_197868.1; NM_122395.5.
DR AlphaFoldDB; O23624; -.
DR BioGRID; 17830; 2.
DR IntAct; O23624; 2.
DR STRING; 3702.AT5G24860.1; -.
DR PaxDb; O23624; -.
DR PRIDE; O23624; -.
DR ProteomicsDB; 248551; -.
DR EnsemblPlants; AT5G24860.1; AT5G24860.1; AT5G24860.
DR GeneID; 832555; -.
DR Gramene; AT5G24860.1; AT5G24860.1; AT5G24860.
DR KEGG; ath:AT5G24860; -.
DR Araport; AT5G24860; -.
DR TAIR; locus:2149368; AT5G24860.
DR eggNOG; ENOG502S12G; Eukaryota.
DR HOGENOM; CLU_121629_0_1_1; -.
DR OMA; WERYHND; -.
DR PhylomeDB; O23624; -.
DR PRO; PR:O23624; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; O23624; baseline and differential.
DR Genevisible; O23624; AT.
DR GO; GO:0009911; P:positive regulation of flower development; IMP:TAIR.
DR GO; GO:0010228; P:vegetative to reproductive phase transition of meristem; IMP:UniProtKB.
DR InterPro; IPR039274; FPF1.
DR PANTHER; PTHR33433; PTHR33433; 1.
PE 1: Evidence at protein level;
KW Reference proteome.
FT CHAIN 1..110
FT /note="Flowering-promoting factor 1"
FT /id="PRO_0000417312"
SQ SEQUENCE 110 AA; 12722 MW; AD1A58DA603A1A6C CRC64;
MSGVWVFKNG VIRLVENPNQ SGSDTQNRRK VMVYLPTGEV VSSYSTLEQI LQSLGWERYF
GGGDTDLLQF HKRSSIDLIS LPRDFTKFNS VYMYDIVVKN PNYFHVRDSH