FPP1_ARATH
ID FPP1_ARATH Reviewed; 779 AA.
AC Q9CAP9; Q84WP8;
DT 02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 25-MAY-2022, entry version 97.
DE RecName: Full=Filament-like plant protein 1;
DE Short=AtFPP1;
GN Name=FPP1; OrderedLocusNames=At1g77580; ORFNames=T5M16.17;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC STRAIN=cv. Columbia;
RX PubMed=14993207; DOI=10.1101/gr.1515604;
RA Castelli V., Aury J.-M., Jaillon O., Wincker P., Clepet C., Menard M.,
RA Cruaud C., Quetier F., Scarpelli C., Schaechter V., Temple G., Caboche M.,
RA Weissenbach J., Salanoubat M.;
RT "Whole genome sequence comparisons and 'full-length' cDNA sequences: a
RT combined approach to evaluate and improve Arabidopsis genome annotation.";
RL Genome Res. 14:406-413(2004).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=11972898; DOI=10.1186/1471-2164-3-9;
RA Gindullis F., Rose A., Patel S., Meier I.;
RT "Four signature motifs define the first class of structurally related large
RT coiled-coil proteins in plants.";
RL BMC Genomics 3:9-9(2002).
CC -!- SUBUNIT: Interacts with WPP/MAF proteins. {ECO:0000250}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q9CAP9-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q9CAP9-2; Sequence=VSP_035072, VSP_035073, VSP_035074;
CC -!- SIMILARITY: Belongs to the FPP family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BX815854; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; AC010704; AAG51666.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE35994.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE35995.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM60713.1; -; Genomic_DNA.
DR EMBL; BT002921; AAO22737.1; -; mRNA.
DR EMBL; BX815854; -; NOT_ANNOTATED_CDS; mRNA.
DR PIR; C96805; C96805.
DR RefSeq; NP_001322979.1; NM_001334786.1. [Q9CAP9-1]
DR RefSeq; NP_177881.2; NM_106406.2. [Q9CAP9-2]
DR RefSeq; NP_974162.1; NM_202433.2. [Q9CAP9-1]
DR AlphaFoldDB; Q9CAP9; -.
DR SMR; Q9CAP9; -.
DR BioGRID; 29312; 1.
DR STRING; 3702.AT1G77580.2; -.
DR iPTMnet; Q9CAP9; -.
DR PaxDb; Q9CAP9; -.
DR PRIDE; Q9CAP9; -.
DR ProteomicsDB; 230111; -. [Q9CAP9-1]
DR EnsemblPlants; AT1G77580.1; AT1G77580.1; AT1G77580. [Q9CAP9-2]
DR EnsemblPlants; AT1G77580.2; AT1G77580.2; AT1G77580. [Q9CAP9-1]
DR EnsemblPlants; AT1G77580.3; AT1G77580.3; AT1G77580. [Q9CAP9-1]
DR GeneID; 844093; -.
DR Gramene; AT1G77580.1; AT1G77580.1; AT1G77580. [Q9CAP9-2]
DR Gramene; AT1G77580.2; AT1G77580.2; AT1G77580. [Q9CAP9-1]
DR Gramene; AT1G77580.3; AT1G77580.3; AT1G77580. [Q9CAP9-1]
DR KEGG; ath:AT1G77580; -.
DR Araport; AT1G77580; -.
DR TAIR; locus:2204755; AT1G77580.
DR eggNOG; ENOG502QQJ4; Eukaryota.
DR HOGENOM; CLU_012828_1_0_1; -.
DR InParanoid; Q9CAP9; -.
DR OMA; MMDKKRW; -.
DR OrthoDB; 190231at2759; -.
DR PhylomeDB; Q9CAP9; -.
DR PRO; PR:Q9CAP9; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9CAP9; baseline and differential.
DR Genevisible; Q9CAP9; AT.
DR InterPro; IPR008587; FPP_plant.
DR Pfam; PF05911; FPP; 3.
PE 2: Evidence at transcript level;
KW Alternative splicing; Coiled coil; Reference proteome.
FT CHAIN 1..779
FT /note="Filament-like plant protein 1"
FT /id="PRO_0000347199"
FT REGION 1..55
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 253..274
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 315..336
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 718..764
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 47..200
FT /evidence="ECO:0000255"
FT COILED 337..674
FT /evidence="ECO:0000255"
FT COMPBIAS 14..28
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 29..55
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 257..271
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 729..764
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VAR_SEQ 1..34
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:14593172"
FT /id="VSP_035072"
FT VAR_SEQ 655..663
FT /note="EDIETAAGK -> VCLQSSGVS (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:14593172"
FT /id="VSP_035073"
FT VAR_SEQ 664..779
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:14593172"
FT /id="VSP_035074"
SQ SEQUENCE 779 AA; 87836 MW; 310B9FCC18C8DAF4 CRC64;
MEKRKRESSE RSFGESESVS SLSEKDSEIQ PESTMESRDD EIQSPTVSLE VETEKEELKD
SMKTLAEKLS AALANVSAKD DLVKQHVKVA EEAVAGWEKA ENEVVELKEK LEAADDKNRV
LEDRVSHLDG ALKECVRQLR QARDEQEQRI QDAVIERTQE LQSSRTSLEN QIFETATKSE
ELSQMAESVA KENVMLRHEL LARCEELEIR TIERDLSTQA AETASKQQLD SIKKVAKLEA
ECRKFRMLAK SSASFNDHRS TDSHSDGGER MDVSCSDSWA SSTLIEKRSL QGTSSSIELD
LMGDFLEMER LVALPETPDG NGKSGPESVT EEVVVPSENS LASEIEVLTS RIKELEEKLE
KLEAEKHELE NEVKCNREEA VVHIENSEVL TSRTKELEEK LEKLEAEKEE LKSEVKCNRE
KAVVHVENSL AAEIEVLTSR TKELEEQLEK LEAEKVELES EVKCNREEAV AQVENSLATE
IEVLTCRIKQ LEEKLEKLEV EKDELKSEVK CNREVESTLR FELEAIACEK MELENKLEKL
EVEKAELQIS FDIIKDKYEE SQVCLQEIET KLGEIQTEMK LVNELKAEVE SQTIAMEADA
KTKSAKIESL EEDMRKERFA FDELRRKCEA LEEEISLHKE NSIKSENKEP KIKQEDIETA
AGKLANCQKT IASLGKQLQS LATLEDFLTD TPIIPMAANG VSSSSNSESW KVHKNETFMT
RNHPESIKPT KETSPSSSSS TASAAVSMPV STNRGSSEKN RNGFATVFTR SKDGIHLAI
