FRS10_ARATH
ID FRS10_ARATH Reviewed; 685 AA.
AC Q9LKR4;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-SEP-2009, sequence version 2.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=Putative protein FAR1-RELATED SEQUENCE 10;
GN Name=FRS10; OrderedLocusNames=At5g28530; ORFNames=T26D3.9;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=15591448; DOI=10.1104/pp.104.052191;
RA Lin R., Wang H.;
RT "Arabidopsis FHY3/FAR1 gene family and distinct roles of its members in
RT light control of Arabidopsis development.";
RL Plant Physiol. 136:4010-4022(2004).
CC -!- SIMILARITY: Belongs to the FHY3/FAR1 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF88018.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AF262043; AAF88018.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED93811.1; -; Genomic_DNA.
DR RefSeq; NP_198205.2; NM_122736.2.
DR AlphaFoldDB; Q9LKR4; -.
DR STRING; 3702.AT5G28530.1; -.
DR PaxDb; Q9LKR4; -.
DR PRIDE; Q9LKR4; -.
DR ProteomicsDB; 230530; -.
DR EnsemblPlants; AT5G28530.1; AT5G28530.1; AT5G28530.
DR GeneID; 832948; -.
DR Gramene; AT5G28530.1; AT5G28530.1; AT5G28530.
DR KEGG; ath:AT5G28530; -.
DR Araport; AT5G28530; -.
DR TAIR; locus:2182778; AT5G28530.
DR eggNOG; ENOG502QR1G; Eukaryota.
DR HOGENOM; CLU_008459_12_2_1; -.
DR InParanoid; Q9LKR4; -.
DR OrthoDB; 207622at2759; -.
DR PhylomeDB; Q9LKR4; -.
DR PRO; PR:Q9LKR4; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LKR4; baseline and differential.
DR Genevisible; Q9LKR4; AT.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR InterPro; IPR004330; FAR1_DNA_bnd_dom.
DR InterPro; IPR031052; FHY3/FAR1.
DR InterPro; IPR018289; MULE_transposase_dom.
DR InterPro; IPR006564; Znf_PMZ.
DR InterPro; IPR007527; Znf_SWIM.
DR PANTHER; PTHR31669; PTHR31669; 1.
DR Pfam; PF03101; FAR1; 1.
DR Pfam; PF10551; MULE; 1.
DR Pfam; PF04434; SWIM; 1.
DR SMART; SM00575; ZnF_PMZ; 1.
DR PROSITE; PS50966; ZF_SWIM; 1.
PE 2: Evidence at transcript level;
KW Metal-binding; Reference proteome; Zinc; Zinc-finger.
FT CHAIN 1..685
FT /note="Putative protein FAR1-RELATED SEQUENCE 10"
FT /id="PRO_0000363488"
FT DOMAIN 69..161
FT /note="FAR1"
FT DOMAIN 292..388
FT /note="MULE"
FT ZN_FING 565..603
FT /note="SWIM-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00325"
SQ SEQUENCE 685 AA; 78525 MW; 97AE88CD1A85CE37 CRC64;
MALKPLNNIW IRRQQCPCGD WKCYIRLEED ESTITKSEIE STPTPTSQYD TVFTPYVGQI
FTTDDEAFEY YSTFARKSGF SIRKARSTES QNLGVYRRDF VCYRSGFNQP RKKANVEHPR
ERKSVRCGCD GKLYLTKEVV DGVSHWYVSQ FSNVHNHELL EDDQVRLLPA YRKIQQSDQE
RILLLSKAGF PVNRIVKLLE LEKGVVSGQL PFIEKDVRNF VRACKKSVQE NDAFMTEKRE
SDTLELLECC KGLAERDMDF VYDCTSDENQ KVENIAWAYG DSVRGYSLFG DVVVFDTSYR
SVPYGLLLGV FFGIDNNGKA MLLGCVLLQD ESCRSFTWAL QTFVRFMRGR HPQTILTDID
TGLKDAIGRE MPNTNHVVFM SHIVSKLASW FSQTLGSHYE EFRAGFDMLC RAGNVDEFEQ
QWDLLVTRFG LVPDRHAALL YSCRASWLPC CIREHFVAQT MTSEFNLSID SFLKRVVDGA
TCMQLLLEES ALQVSAAASL AKQILPRFTY PSLKTCMPME DHARGILTPY AFSVLQNEMV
LSVQYAVAEM ANGPFIVHHY KKMEGECCVI WNPENEEIQC SCKEFEHSGI LCRHTLRVLT
VKNCFHIPEQ YFLLRWRQES PHVATENQNG QGIGDDSAQT FHSLTETLLT ESMISKDRLD
YANQELSLLI DRVRNTAPAN CLYQP
