FRS8_ARATH
ID FRS8_ARATH Reviewed; 725 AA.
AC Q9S793;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 31-MAY-2011, sequence version 2.
DT 03-AUG-2022, entry version 111.
DE RecName: Full=Protein FAR1-RELATED SEQUENCE 8;
GN Name=FRS8; OrderedLocusNames=At1g80010; ORFNames=F18B13.10, F19K16.2;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP FUNCTION, TISSUE SPECIFICITY, INDUCTION, SUBCELLULAR LOCATION, GENE FAMILY,
RP AND NOMENCLATURE.
RX PubMed=15591448; DOI=10.1104/pp.104.052191;
RA Lin R., Wang H.;
RT "Arabidopsis FHY3/FAR1 gene family and distinct roles of its members in
RT light control of Arabidopsis development.";
RL Plant Physiol. 136:4010-4022(2004).
CC -!- FUNCTION: Putative transcription activator involved in regulating light
CC control of development. May have a role in controlling flowering time.
CC {ECO:0000269|PubMed:15591448}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:15591448}. Note=The
CC nuclear localization is independent of the light treatment.
CC -!- TISSUE SPECIFICITY: Expressed in hypocotyls, rosette and cauline
CC leaves, inflorescences stems, flowers and siliques.
CC {ECO:0000269|PubMed:15591448}.
CC -!- INDUCTION: Up-regulated in hypocotyls by far-red light treatment.
CC {ECO:0000269|PubMed:15591448}.
CC -!- SIMILARITY: Belongs to the FHY3/FAR1 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD55466.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AAG52241.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC009322; AAD55466.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AC011717; AAG52241.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE36344.1; -; Genomic_DNA.
DR PIR; E96831; E96831.
DR RefSeq; NP_178118.2; NM_106650.3.
DR AlphaFoldDB; Q9S793; -.
DR STRING; 3702.AT1G80010.1; -.
DR PaxDb; Q9S793; -.
DR PRIDE; Q9S793; -.
DR ProteomicsDB; 230551; -.
DR EnsemblPlants; AT1G80010.1; AT1G80010.1; AT1G80010.
DR GeneID; 844341; -.
DR Gramene; AT1G80010.1; AT1G80010.1; AT1G80010.
DR KEGG; ath:AT1G80010; -.
DR Araport; AT1G80010; -.
DR TAIR; locus:2016259; AT1G80010.
DR eggNOG; ENOG502QS51; Eukaryota.
DR HOGENOM; CLU_008459_5_0_1; -.
DR InParanoid; Q9S793; -.
DR OMA; PYESQMA; -.
DR OrthoDB; 259883at2759; -.
DR PRO; PR:Q9S793; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9S793; baseline and differential.
DR Genevisible; Q9S793; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR InterPro; IPR004330; FAR1_DNA_bnd_dom.
DR InterPro; IPR031052; FHY3/FAR1.
DR InterPro; IPR018289; MULE_transposase_dom.
DR InterPro; IPR006564; Znf_PMZ.
DR InterPro; IPR007527; Znf_SWIM.
DR PANTHER; PTHR31669; PTHR31669; 1.
DR Pfam; PF03101; FAR1; 1.
DR Pfam; PF10551; MULE; 1.
DR Pfam; PF04434; SWIM; 1.
DR SMART; SM00575; ZnF_PMZ; 1.
DR PROSITE; PS50966; ZF_SWIM; 1.
PE 2: Evidence at transcript level;
KW Metal-binding; Nucleus; Reference proteome; Zinc; Zinc-finger.
FT CHAIN 1..725
FT /note="Protein FAR1-RELATED SEQUENCE 8"
FT /id="PRO_0000363486"
FT DOMAIN 109..193
FT /note="FAR1"
FT DOMAIN 327..416
FT /note="MULE"
FT ZN_FING 604..643
FT /note="SWIM-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00325"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 190..224
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 725 AA; 82564 MW; 1ABA16FEA5B229DB CRC64;
MIGNSVYISP SPSPSDHSLS PNPNLCISAM EEQLVVDDDD DDLAPPPIPD LDIDLEDDDD
ACCHGLLHIA PNHEEETGCD ENAFANEKCL MAPPPTPGME FESYDDAYSF YNSYARELGF
AIRVKSSWTK RNSKEKRGAV LCCNCQGFKL LKDAHSRRKE TRTGCQAMIR LRLIHFDRWK
VDQVKLDHNH SFDPQRAHNS KSHKKSSSSA SPATKTNPEP PPHVQVRTIK LYRTLALDTP
PALGTSLSSG ETSDLSLDHF QSSRRLELRG GFRALQDFFF QIQLSSPNFL YLMDLADDGS
LRNVFWIDAR ARAAYSHFGD VLLFDTTCLS NAYELPLVAF VGINHHGDTI LLGCGLLADQ
SFETYVWLFR AWLTCMLGRP PQIFITEQCK AMRTAVSEVF PRAHHRLSLT HVLHNICQSV
VQLQDSDLFP MALNRVVYGC LKVEEFETAW EEMIIRFGMT NNETIRDMFQ DRELWAPVYL
KDTFLAGALT FPLGNVAAPF IFSGYVHENT SLREFLEGYE SFLDKKYTRE ALCDSESLKL
IPKLKTTHPY ESQMAKVFTM EIFRRFQDEV SAMSSCFGVT QVHSNGSASS YVVKEREGDK
VRDFEVIYET SAAAQVRCFC VCGGFSFNGY QCRHVLLLLS HNGLQEVPPQ YILQRWRKDV
KRLYVAEFGS GRVDIMNPDQ WYEHLHRRAM QVVEQGMRSK EHCRAAWEAF RECANKVQFV
TEKPS
