FXL20_RAT
ID FXL20_RAT Reviewed; 276 AA.
AC Q9QZH7;
DT 21-NOV-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 129.
DE RecName: Full=F-box/LRR-repeat protein 20;
DE AltName: Full=F-box and leucine-rich repeat protein 20;
DE AltName: Full=F-box/LRR-repeat protein 2-like;
GN Name=Fbxl20; Synonyms=Fbl2;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], INTERACTION WITH SKP1, SUBCELLULAR LOCATION,
RP AND TISSUE SPECIFICITY.
RC STRAIN=Buffalo; TISSUE=Liver;
RX PubMed=10508920; DOI=10.1016/s0014-5793(99)01211-9;
RA Ilyin G.P., Rialland M., Glaise D., Guguen-Guillouzo C.;
RT "Identification of a novel Skp2-like mammalian protein containing F-box and
RT leucine-rich repeats.";
RL FEBS Lett. 459:75-79(1999).
CC -!- FUNCTION: Substrate-recognition component of the SCF (SKP1-CUL1-F-box
CC protein)-type E3 ubiquitin ligase complex. Role in neural transmission
CC (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Interacts with SKP1 and CUL1. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:10508920}.
CC -!- TISSUE SPECIFICITY: Widely expressed, with highest expression in
CC skeletal muscle, heart and brain. {ECO:0000269|PubMed:10508920}.
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DR EMBL; AF182443; AAF01221.1; -; mRNA.
DR PIR; T52349; T52349.
DR RefSeq; NP_071608.1; NM_022272.1.
DR AlphaFoldDB; Q9QZH7; -.
DR SMR; Q9QZH7; -.
DR STRING; 10116.ENSRNOP00000060552; -.
DR PaxDb; Q9QZH7; -.
DR PRIDE; Q9QZH7; -.
DR GeneID; 64039; -.
DR KEGG; rno:64039; -.
DR UCSC; RGD:621722; rat.
DR CTD; 84961; -.
DR RGD; 621722; Fbxl20.
DR eggNOG; KOG4341; Eukaryota.
DR HOGENOM; CLU_016072_7_1_1; -.
DR InParanoid; Q9QZH7; -.
DR OrthoDB; 1046098at2759; -.
DR PhylomeDB; Q9QZH7; -.
DR PRO; PR:Q9QZH7; -.
DR Proteomes; UP000002494; Unplaced.
DR Genevisible; Q9QZH7; RN.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0098978; C:glutamatergic synapse; ISO:RGD.
DR GO; GO:0098793; C:presynapse; IEA:GOC.
DR GO; GO:0019005; C:SCF ubiquitin ligase complex; IBA:GO_Central.
DR GO; GO:0098685; C:Schaffer collateral - CA1 synapse; ISO:RGD.
DR GO; GO:0045202; C:synapse; ISO:RGD.
DR GO; GO:0001662; P:behavioral fear response; ISO:RGD.
DR GO; GO:0099575; P:regulation of protein catabolic process at presynapse, modulating synaptic transmission; ISO:RGD.
DR GO; GO:2000300; P:regulation of synaptic vesicle exocytosis; ISO:RGD.
DR GO; GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR006553; Leu-rich_rpt_Cys-con_subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF12937; F-box-like; 1.
DR Pfam; PF13516; LRR_6; 3.
DR SMART; SM00256; FBOX; 1.
DR SMART; SM00367; LRR_CC; 7.
DR PROSITE; PS50181; FBOX; 1.
PE 1: Evidence at protein level;
KW Cytoplasm; Leucine-rich repeat; Reference proteome; Repeat;
KW Ubl conjugation pathway.
FT CHAIN 1..276
FT /note="F-box/LRR-repeat protein 20"
FT /id="PRO_0000119872"
FT DOMAIN 22..68
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 74..100
FT /note="LRR 1"
FT REPEAT 101..126
FT /note="LRR 2"
FT REPEAT 127..152
FT /note="LRR 3"
FT REPEAT 153..178
FT /note="LRR 4"
FT REPEAT 179..204
FT /note="LRR 5"
FT REPEAT 205..230
FT /note="LRR 6"
FT REPEAT 231..256
FT /note="LRR 7"
FT REPEAT 257..276
FT /note="LRR 8"
SQ SEQUENCE 276 AA; 30460 MW; 982994F91A265E1E CRC64;
MRRDVNGVTK SRFEMFSNSD EAVINKKLPK ELLLRIFSFL DVVTLCRCAQ VSRAWNVLAL
DGSNWQRIDL FDFQRDIEGR VVENISKRCG GFLRKLSLRG CLGVGDNALR TFAQNCRNIE
VLSLNGCTKT TDATCTSLSK FCSKLRHLDL ASCTSITNMS LKALSEGCPL LEQLNISWCD
QVTKDGIQAL VRGCGGLKAL FLKGCTQLED EALKYIGAHC PELVTLNLQT CLQITDEGLI
TICRGCHKLQ SLCASGCSNI TDAILNALGQ NCPRLR