FZP_ORYSJ
ID FZP_ORYSJ Reviewed; 318 AA.
AC Q8H3Q1; A1KZD0; A3BN90;
DT 25-OCT-2017, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 03-AUG-2022, entry version 135.
DE RecName: Full=Ethylene-responsive transcription factor FZP {ECO:0000305};
DE AltName: Full=OsERF078 {ECO:0000303|PubMed:16407444};
DE AltName: Full=Protein BRANCHED FLORETLESS 1 {ECO:0000303|PubMed:14503923};
DE AltName: Full=Protein FRIZZY PANICLE {ECO:0000303|PubMed:12835399};
DE AltName: Full=Protein FRIZZY PANICLE 2 {ECO:0000303|PubMed:11237465};
GN Name=FZP {ECO:0000303|PubMed:12835399};
GN Synonyms=BFL1 {ECO:0000303|PubMed:14503923}, ERF78 {ECO:0000305},
GN FZP2 {ECO:0000303|PubMed:11237465};
GN OrderedLocusNames=Os07g0669500 {ECO:0000312|EMBL:BAF22501.1},
GN LOC_Os07g47330 {ECO:0000305};
GN ORFNames=OsJ_25514 {ECO:0000312|EMBL:EAZ41029.1},
GN P0625E02.126 {ECO:0000312|EMBL:BAC16657.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, DEVELOPMENTAL STAGE, AND
RP MUTAGENESIS OF ARG-81 AND THR-86.
RX PubMed=12835399; DOI=10.1242/dev.00564;
RA Komatsu M., Chujo A., Nagato Y., Shimamoto K., Kyozuka J.;
RT "FRIZZY PANICLE is required to prevent the formation of axillary meristems
RT and to establish floral meristem identity in rice spikelets.";
RL Development 130:3841-3850(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [7]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 31-309.
RA Wu C.-I., Lu J., Tang T., Tang H., Huang J., Wang J., Yu J., Shi S.;
RT "A hypothesis on the genetic cost of domestication: Inference from rice
RT genomic sequences.";
RL Submitted (JAN-2005) to the EMBL/GenBank/DDBJ databases.
RN [8]
RP IDENTIFICATION OF FRIZZY PANICLE DISRUPTION PHENOTYPE.
RX PubMed=11237465; DOI=10.1006/dbio.2000.9988;
RA Komatsu M., Maekawa M., Shimamoto K., Kyozuka J.;
RT "The LAX1 and FRIZZY PANICLE 2 genes determine the inflorescence
RT architecture of rice by controlling rachis-branch and spikelet
RT development.";
RL Dev. Biol. 231:364-373(2001).
RN [9]
RP FUNCTION, AND DISRUPTION PHENOTYPE.
RX PubMed=14503923; DOI=10.1186/1471-2229-3-6;
RA Zhu Q.H., Hoque M.S., Dennis E.S., Upadhyaya N.M.;
RT "Ds tagging of BRANCHED FLORETLESS 1 (BFL1) that mediates the transition
RT from spikelet to floret meristem in rice (Oryza sativa L).";
RL BMC Plant Biol. 3:6-6(2003).
RN [10]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=16407444; DOI=10.1104/pp.105.073783;
RA Nakano T., Suzuki K., Fujimura T., Shinshi H.;
RT "Genome-wide analysis of the ERF gene family in Arabidopsis and rice.";
RL Plant Physiol. 140:411-432(2006).
RN [11]
RP FUNCTION.
RX PubMed=26744119; DOI=10.1038/srep19022;
RA Bai X., Huang Y., Mao D., Wen M., Zhang L., Xing Y.;
RT "Regulatory role of FZP in the determination of panicle branching and
RT spikelet formation in rice.";
RL Sci. Rep. 6:19022-19022(2016).
CC -!- FUNCTION: Required to prevent the formation of axillary meristems
CC within the spikelet meristem and permit the subsequent establishment of
CC floral meristem identity (PubMed:12835399, PubMed:14503923). Mediates
CC the transition from spikelet to floret meristem (PubMed:14503923).
CC Determines the transition from panicle branching to spikelet formation.
CC May specify floral organ identity by regulating the class B genes
CC (Agamous-like genes) MADS6 and MADS17, as well as class E genes MADS1,
CC MADS7 and MADS8 in floral meristem (PubMed:26744119). Possesses
CC transactivation activity (PubMed:12835399).
CC {ECO:0000269|PubMed:12835399, ECO:0000269|PubMed:14503923,
CC ECO:0000269|PubMed:26744119}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00366}.
CC -!- DEVELOPMENTAL STAGE: Expressed at the time of rudimentary glumes
CC differentiation in a half-ring domain at the base of the rudimentary
CC glume primordium.
CC -!- DISRUPTION PHENOTYPE: Altered specification of terminal and lateral
CC spikelet meristems, resulting in the generation of a panicle composed
CC of excessive ramification of rachis-branches.
CC {ECO:0000269|PubMed:11237465}.
CC -!- SIMILARITY: Belongs to the AP2/ERF transcription factor family. ERF
CC subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=EAZ41029.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AB103120; BAC79264.1; -; Genomic_DNA.
DR EMBL; AP004570; BAC16657.1; -; Genomic_DNA.
DR EMBL; AP008213; BAF22501.1; -; Genomic_DNA.
DR EMBL; AP014963; BAT03139.1; -; Genomic_DNA.
DR EMBL; CM000144; EAZ41029.1; ALT_INIT; Genomic_DNA.
DR EMBL; AK105365; BAG97213.1; -; mRNA.
DR EMBL; AY885985; AAX83542.1; -; Genomic_DNA.
DR EMBL; AY885980; AAX83537.1; -; Genomic_DNA.
DR EMBL; AY885981; AAX83538.1; -; Genomic_DNA.
DR EMBL; AY885982; AAX83539.1; -; Genomic_DNA.
DR EMBL; AY885983; AAX83540.1; -; Genomic_DNA.
DR EMBL; AY885984; AAX83541.1; -; Genomic_DNA.
DR AlphaFoldDB; Q8H3Q1; -.
DR SMR; Q8H3Q1; -.
DR STRING; 4530.OS07T0669500-01; -.
DR PaxDb; Q8H3Q1; -.
DR PRIDE; Q8H3Q1; -.
DR EnsemblPlants; Os07t0669500-01; Os07t0669500-01; Os07g0669500.
DR Gramene; Os07t0669500-01; Os07t0669500-01; Os07g0669500.
DR eggNOG; ENOG502QQPC; Eukaryota.
DR HOGENOM; CLU_078905_0_0_1; -.
DR InParanoid; Q8H3Q1; -.
DR OMA; DAYGMGM; -.
DR OrthoDB; 1363702at2759; -.
DR Proteomes; UP000000763; Chromosome 7.
DR Proteomes; UP000007752; Chromosome 7.
DR Proteomes; UP000059680; Chromosome 7.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0010582; P:floral meristem determinacy; IMP:UniProtKB.
DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:UniProtKB.
DR GO; GO:2000032; P:regulation of secondary shoot formation; IMP:UniProtKB.
DR CDD; cd00018; AP2; 1.
DR Gene3D; 3.30.730.10; -; 1.
DR InterPro; IPR001471; AP2/ERF_dom.
DR InterPro; IPR036955; AP2/ERF_dom_sf.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR Pfam; PF00847; AP2; 1.
DR PRINTS; PR00367; ETHRSPELEMNT.
DR SMART; SM00380; AP2; 1.
DR SUPFAM; SSF54171; SSF54171; 1.
DR PROSITE; PS51032; AP2_ERF; 1.
PE 1: Evidence at protein level;
KW Developmental protein; DNA-binding; Nucleus; Reference proteome;
KW Transcription; Transcription regulation.
FT CHAIN 1..318
FT /note="Ethylene-responsive transcription factor FZP"
FT /id="PRO_0000441777"
FT DNA_BIND 57..114
FT /note="AP2/ERF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00366"
FT REGION 1..59
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 158..178
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..21
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 27..41
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 44..58
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 158..172
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MUTAGEN 81
FT /note="R->L: In fzp-2; absence of floret formation and
FT replacement by excessive ramification of rachis-branches."
FT /evidence="ECO:0000269|PubMed:12835399"
FT MUTAGEN 86
FT /note="T->M: In fzp-3; absence of floret formation and
FT replacement by excessive ramification of rachis-branches."
FT /evidence="ECO:0000269|PubMed:12835399"
SQ SEQUENCE 318 AA; 33541 MW; 3573139EDB881D8A CRC64;
MNTRGSGSSS SSSSSQASLM AFSEPPKPAS QPSPPSSPMS ERPPSGRSRR RAQEPGRFLG
VRRRPWGRYA AEIRDPTTKE RHWLGTFDTA QEAALAYDRA ALSMKGAQAR TNFVYTHAAY
NYPPFLAPFH APQYAAAAAA PSSVQYGGGV GAAPHIGSYG HHHHHHHHHG HGAASGASSV
GECSTMPVMV PVDPHRSSMS SSLLDMDRNG HDFLFSGADD NSGYLSSVVP ESCLRPRGGG
AAADHQDMRR YSDADAYGMM GLREDVDDLA QMVAGFWGGG DAADQLGACG FPASGGAADM
VASSQGSDSY SPFSFLSH
