G1L3_ORYSJ
ID G1L3_ORYSJ Reviewed; 232 AA.
AC Q0DZF3; Q6K1Q1;
DT 19-FEB-2014, integrated into UniProtKB/Swiss-Prot.
DT 17-OCT-2006, sequence version 1.
DT 03-AUG-2022, entry version 78.
DE RecName: Full=Protein G1-like3;
GN Name=G1L3; OrderedLocusNames=Os02g0623400, LOC_Os02g41460;
GN ORFNames=B1215B07.4, OSJNOa148N02.6;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], GENE FAMILY, AND NOMENCLATURE.
RC STRAIN=cv. Nipponbare;
RX PubMed=19901325; DOI=10.1073/pnas.0907896106;
RA Yoshida A., Suzaki Y., Tanaka W., Hirano H.-Y.;
RT "The homeotic gene long sterile lemma (G1) specifies sterile lemma identity
RT in the rice spikelet.";
RL Proc. Natl. Acad. Sci. U.S.A. 106:20103-20108(2009).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP DNA-BINDING, AND GENE FAMILY.
RX PubMed=23146749; DOI=10.1186/1745-6150-7-39;
RA Iyer L.M., Aravind L.;
RT "ALOG domains: provenance of plant homeotic and developmental regulators
RT from the DNA-binding domain of a novel class of DIRS1-type retroposons.";
RL Biol. Direct 7:39-39(2012).
CC -!- FUNCTION: Probable transcription regulator that acts as a developmental
CC regulator by promoting cell growth in response to light. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the plant homeotic and developmental regulators
CC ALOG protein family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAD22522.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAD23769.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB512492; BAI52981.1; -; Genomic_DNA.
DR EMBL; AP006523; BAD23769.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP006847; BAD22522.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008208; BAF09385.1; -; Genomic_DNA.
DR EMBL; AP014958; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; Q0DZF3; -.
DR STRING; 4530.OS02T0623400-00; -.
DR PaxDb; Q0DZF3; -.
DR PRIDE; Q0DZF3; -.
DR eggNOG; ENOG502QPZE; Eukaryota.
DR HOGENOM; CLU_071168_0_1_1; -.
DR InParanoid; Q0DZF3; -.
DR Proteomes; UP000000763; Chromosome 2.
DR Proteomes; UP000059680; Chromosome 2.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0009299; P:mRNA transcription; ISS:UniProtKB.
DR GO; GO:0090698; P:post-embryonic plant morphogenesis; ISS:UniProtKB.
DR GO; GO:0009416; P:response to light stimulus; IBA:GO_Central.
DR InterPro; IPR040222; ALOG.
DR InterPro; IPR006936; ALOG_dom.
DR PANTHER; PTHR31165; PTHR31165; 1.
DR Pfam; PF04852; DUF640; 1.
DR PROSITE; PS51697; ALOG; 1.
PE 1: Evidence at protein level;
KW Developmental protein; DNA-binding; Nucleus; Reference proteome;
KW Transcription; Transcription regulation.
FT CHAIN 1..232
FT /note="Protein G1-like3"
FT /id="PRO_0000425303"
FT DOMAIN 73..200
FT /note="ALOG"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01033"
FT REGION 20..77
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 189..232
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 198..202
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000250"
FT COMPBIAS 52..73
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 213..232
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 232 AA; 24098 MW; B6C88F54AE389E28 CRC64;
MRGEEEPAVA AAAYTTASKA GLLMELSPPN HESSPPTAGG GGGGGGDGAG GSSSAGASSS
AGGGAATPQT PSRYEAQKRR DWNTFGQYLR NHRPPLGLAQ CSGAHVLEFL RYLDQFGKTK
VHTAACPFFG HPNPPAPCPC PLRQAWGSLD ALVGRLRAAF EENGGRPESN PFAVRAVRLY
LREVREHQAR ARGVSYEKKK RKKPQPADTS GGGGHPHPPP PPPPPPSAGA AC