G1L9_ORYSJ
ID G1L9_ORYSJ Reviewed; 284 AA.
AC Q5W659; A0A0P0WLA5;
DT 19-FEB-2014, integrated into UniProtKB/Swiss-Prot.
DT 07-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 92.
DE RecName: Full=Protein G1-like9;
GN Name=G1L9; OrderedLocusNames=Os05g0347400, LOC_Os05g28040;
GN ORFNames=B1164G01.10, OSJNBb0052F16.2;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], GENE FAMILY, AND NOMENCLATURE.
RC STRAIN=cv. Nipponbare;
RX PubMed=19901325; DOI=10.1073/pnas.0907896106;
RA Yoshida A., Suzaki Y., Tanaka W., Hirano H.-Y.;
RT "The homeotic gene long sterile lemma (G1) specifies sterile lemma identity
RT in the rice spikelet.";
RL Proc. Natl. Acad. Sci. U.S.A. 106:20103-20108(2009).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT "A fine physical map of the rice chromosome 5.";
RL Mol. Genet. Genomics 274:337-345(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [7]
RP DNA-BINDING, AND GENE FAMILY.
RX PubMed=23146749; DOI=10.1186/1745-6150-7-39;
RA Iyer L.M., Aravind L.;
RT "ALOG domains: provenance of plant homeotic and developmental regulators
RT from the DNA-binding domain of a novel class of DIRS1-type retroposons.";
RL Biol. Direct 7:39-39(2012).
CC -!- FUNCTION: Probable transcription regulator that acts as a developmental
CC regulator by promoting cell growth in response to light. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the plant homeotic and developmental regulators
CC ALOG protein family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AB512498; BAI52987.1; -; mRNA.
DR EMBL; AC134928; AAV43818.1; -; Genomic_DNA.
DR EMBL; AC144742; AAV44098.1; -; Genomic_DNA.
DR EMBL; AP008211; BAF17180.1; -; Genomic_DNA.
DR EMBL; AP014961; BAS93508.1; -; Genomic_DNA.
DR EMBL; AK106384; BAG97704.1; -; mRNA.
DR RefSeq; XP_015638042.1; XM_015782556.1.
DR AlphaFoldDB; Q5W659; -.
DR SMR; Q5W659; -.
DR STRING; 4530.OS05T0347400-01; -.
DR PaxDb; Q5W659; -.
DR PRIDE; Q5W659; -.
DR EnsemblPlants; Os05t0347400-01; Os05t0347400-01; Os05g0347400.
DR GeneID; 4338491; -.
DR Gramene; Os05t0347400-01; Os05t0347400-01; Os05g0347400.
DR KEGG; osa:4338491; -.
DR eggNOG; ENOG502QPZE; Eukaryota.
DR HOGENOM; CLU_071168_2_1_1; -.
DR InParanoid; Q5W659; -.
DR OrthoDB; 1383354at2759; -.
DR Proteomes; UP000000763; Chromosome 5.
DR Proteomes; UP000059680; Chromosome 5.
DR Genevisible; Q5W659; OS.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0009299; P:mRNA transcription; ISS:UniProtKB.
DR GO; GO:0090698; P:post-embryonic plant morphogenesis; ISS:UniProtKB.
DR GO; GO:0009416; P:response to light stimulus; IBA:GO_Central.
DR InterPro; IPR040222; ALOG.
DR InterPro; IPR006936; ALOG_dom.
DR PANTHER; PTHR31165; PTHR31165; 1.
DR Pfam; PF04852; DUF640; 1.
DR PROSITE; PS51697; ALOG; 1.
PE 1: Evidence at protein level;
KW Developmental protein; DNA-binding; Nucleus; Reference proteome;
KW Transcription; Transcription regulation.
FT CHAIN 1..284
FT /note="Protein G1-like9"
FT /id="PRO_0000425314"
FT DOMAIN 67..194
FT /note="ALOG"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01033"
FT REGION 1..69
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 209..284
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 192..196
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000250"
FT COMPBIAS 17..55
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 242..269
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 284 AA; 29440 MW; 884128D391621896 CRC64;
MEPSPDAPRA GAAEEQPGPS SSASAPAPAA SSNEEEGRHQ SQAQQQVQEA QPQPLAQQAP
AAAGLSRYES QKRRDWNTFL QYLRNHKPPL TLPRCSGAHV IEFLKYLDQF GKTKVHADGC
AYFGEPNPPA PCACPLRQAW GSLDALIGRL RAAYEESGGR PESNPFAARA VRIYLREVRE
AQAKARGIPY EKKRKRGAAA AAAAPPVVVA PPPVVTAPDD ATGTSGGAGE DDDDDEATHS
GEQQDTTPAA SPTTPPATSV GTTTAAATAA AAKGSAAKGS ATSS
