G1_ORYSJ
ID G1_ORYSJ Reviewed; 276 AA.
AC Q8GVZ6; A0A0P0X2M8;
DT 19-FEB-2014, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 03-AUG-2022, entry version 71.
DE RecName: Full=Protein G1;
DE AltName: Full=Protein ELONGATED EMPTY GLUME;
GN Name=G1; Synonyms=ELE; OrderedLocusNames=Os07g0139300, LOC_Os07g04670;
GN ORFNames=OJ1417_E01.118, P0495H05.58;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, DISRUPTION PHENOTYPE, TISSUE
RP SPECIFICITY, SUBCELLULAR LOCATION, GENE FAMILY, AND NOMENCLATURE.
RC STRAIN=cv. Nipponbare;
RX PubMed=19901325; DOI=10.1073/pnas.0907896106;
RA Yoshida A., Suzaki Y., Tanaka W., Hirano H.-Y.;
RT "The homeotic gene long sterile lemma (G1) specifies sterile lemma identity
RT in the rice spikelet.";
RL Proc. Natl. Acad. Sci. U.S.A. 106:20103-20108(2009).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, DISRUPTION PHENOTYPE, TISSUE
RP SPECIFICITY, AND SUBCELLULAR LOCATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=20227044; DOI=10.1016/s1673-8527(09)60029-1;
RA Hong L., Qian Q., Zhu K., Tang D., Huang Z., Gao L., Li M., Gu M.,
RA Cheng Z.;
RT "ELE restrains empty glumes from developing into lemmas.";
RL J. Genet. Genomics 37:101-115(2010).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [6]
RP DNA-BINDING, AND GENE FAMILY.
RX PubMed=23146749; DOI=10.1186/1745-6150-7-39;
RA Iyer L.M., Aravind L.;
RT "ALOG domains: provenance of plant homeotic and developmental regulators
RT from the DNA-binding domain of a novel class of DIRS1-type retroposons.";
RL Biol. Direct 7:39-39(2012).
CC -!- FUNCTION: Probable transcription regulator that acts as a developmental
CC regulator by promoting cell growth in response to light (By
CC similarity). Transcription regulator that restrains empty glumes
CC growth, lemmas of the sterile florets located at the lateral side of
CC the rice spikelet, to maintain their small size, probably by repressing
CC lemma identity via transcription regulation. {ECO:0000250,
CC ECO:0000269|PubMed:19901325, ECO:0000269|PubMed:20227044}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:19901325,
CC ECO:0000269|PubMed:20227044}.
CC -!- TISSUE SPECIFICITY: Expressed at the empty glumes of immature
CC spikelets, which are lemmas of the sterile florets located at the
CC lateral side of the spikelet, throughout their development.
CC {ECO:0000269|PubMed:19901325, ECO:0000269|PubMed:20227044}.
CC -!- DISRUPTION PHENOTYPE: Enlarged sterile lemma in florets of the
CC spikelet, caused by homeotic transformation of the sterile lemma into a
CC lemma. Elongated empty glumes, which mimic the lemmas and have the
CC epidermal morphology of lemmas with four or five vascular bundles.
CC {ECO:0000269|PubMed:19901325, ECO:0000269|PubMed:20227044}.
CC -!- SIMILARITY: Belongs to the plant homeotic and developmental regulators
CC ALOG protein family. {ECO:0000305}.
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DR EMBL; AB512480; BAI52969.1; -; mRNA.
DR EMBL; FJ502130; ACT67591.1; -; Genomic_DNA.
DR EMBL; AP003829; BAC45053.1; -; Genomic_DNA.
DR EMBL; AP004314; BAC83499.1; -; Genomic_DNA.
DR EMBL; AP014963; BAS99995.1; -; Genomic_DNA.
DR RefSeq; XP_015646356.1; XM_015790870.1.
DR AlphaFoldDB; Q8GVZ6; -.
DR SMR; Q8GVZ6; -.
DR STRING; 4530.OS07T0139300-00; -.
DR PaxDb; Q8GVZ6; -.
DR PRIDE; Q8GVZ6; -.
DR EnsemblPlants; Os07t0139300-01; Os07t0139300-01; Os07g0139300.
DR GeneID; 107276238; -.
DR Gramene; Os07t0139300-01; Os07t0139300-01; Os07g0139300.
DR KEGG; osa:107276238; -.
DR eggNOG; ENOG502QT0B; Eukaryota.
DR HOGENOM; CLU_071168_0_0_1; -.
DR InParanoid; Q8GVZ6; -.
DR OMA; TRVHEPP; -.
DR OrthoDB; 1383354at2759; -.
DR Proteomes; UP000000763; Chromosome 7.
DR Proteomes; UP000059680; Chromosome 7.
DR Genevisible; Q8GVZ6; OS.
DR GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0048449; P:floral organ formation; IMP:UniProtKB.
DR GO; GO:0009299; P:mRNA transcription; IDA:UniProtKB.
DR GO; GO:0090698; P:post-embryonic plant morphogenesis; IMP:UniProtKB.
DR GO; GO:0009909; P:regulation of flower development; IMP:UniProtKB.
DR GO; GO:0009416; P:response to light stimulus; IBA:GO_Central.
DR InterPro; IPR040222; ALOG.
DR InterPro; IPR006936; ALOG_dom.
DR PANTHER; PTHR31165; PTHR31165; 1.
DR Pfam; PF04852; DUF640; 1.
DR PROSITE; PS51697; ALOG; 1.
PE 1: Evidence at protein level;
KW Developmental protein; DNA-binding; Nucleus; Reference proteome;
KW Transcription; Transcription regulation.
FT CHAIN 1..276
FT /note="Protein G1"
FT /id="PRO_0000425298"
FT DOMAIN 24..183
FT /note="ALOG"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01033"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 178..213
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 181..185
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000250"
SQ SEQUENCE 276 AA; 28497 MW; B390385113BFCE6D CRC64;
MSSSSAAALG SDDGCSPAEL RPSRYESQKR RDWQTFTQYL AAHRPPLELR RCSGAHVLEF
LRYLDRFGKT RVHEPPCPSY GGRSPSAAGP VAAAAAACQC PLRQAWGSLD ALVGRLRAAY
DERHGRAGEP DAVAGAGAVA TDSTSSSSAA AANPFAARAV RLYLRDVRDA QAMARGISYH
KKKKRRGGNM NGARGGGGGG ARAGVNDGDA TAPPVAVTPG LPLPPLPPCL NGVPFEYCDF
GSVLGGAHGA HGGHGGGGGG FYGAGVYLPF LYNTFS
