GABAT_USTMA
ID GABAT_USTMA Reviewed; 509 AA.
AC P49604; A0A0D1E6G7; Q4PFN3;
DT 01-FEB-1996, integrated into UniProtKB/Swiss-Prot.
DT 12-DEC-2006, sequence version 2.
DT 03-AUG-2022, entry version 127.
DE RecName: Full=4-aminobutyrate aminotransferase;
DE EC=2.6.1.19;
DE AltName: Full=GABA aminotransferase;
DE Short=GABA-AT;
DE AltName: Full=Gamma-amino-N-butyrate transaminase;
DE Short=GABA transaminase;
GN Name=GATA; ORFNames=UMAG_01080;
OS Ustilago maydis (strain 521 / FGSC 9021) (Corn smut fungus).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina;
OC Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago.
OX NCBI_TaxID=237631;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, AND INDUCTION.
RC STRAIN=518;
RX PubMed=8598057; DOI=10.1007/bf02208617;
RA Straffon M.J., Hynes M.J., Davis M.A.;
RT "Characterization of the ugatA gene of Ustilago maydis, isolated by
RT homology to the gatA gene of Aspergillus nidulans.";
RL Curr. Genet. 29:360-369(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=521 / FGSC 9021;
RX PubMed=17080091; DOI=10.1038/nature05248;
RA Kaemper J., Kahmann R., Boelker M., Ma L.-J., Brefort T., Saville B.J.,
RA Banuett F., Kronstad J.W., Gold S.E., Mueller O., Perlin M.H.,
RA Woesten H.A.B., de Vries R., Ruiz-Herrera J., Reynaga-Pena C.G.,
RA Snetselaar K., McCann M., Perez-Martin J., Feldbruegge M., Basse C.W.,
RA Steinberg G., Ibeas J.I., Holloman W., Guzman P., Farman M.L.,
RA Stajich J.E., Sentandreu R., Gonzalez-Prieto J.M., Kennell J.C., Molina L.,
RA Schirawski J., Mendoza-Mendoza A., Greilinger D., Muench K., Roessel N.,
RA Scherer M., Vranes M., Ladendorf O., Vincon V., Fuchs U., Sandrock B.,
RA Meng S., Ho E.C.H., Cahill M.J., Boyce K.J., Klose J., Klosterman S.J.,
RA Deelstra H.J., Ortiz-Castellanos L., Li W., Sanchez-Alonso P.,
RA Schreier P.H., Haeuser-Hahn I., Vaupel M., Koopmann E., Friedrich G.,
RA Voss H., Schlueter T., Margolis J., Platt D., Swimmer C., Gnirke A.,
RA Chen F., Vysotskaia V., Mannhaupt G., Gueldener U., Muensterkoetter M.,
RA Haase D., Oesterheld M., Mewes H.-W., Mauceli E.W., DeCaprio D., Wade C.M.,
RA Butler J., Young S.K., Jaffe D.B., Calvo S.E., Nusbaum C., Galagan J.E.,
RA Birren B.W.;
RT "Insights from the genome of the biotrophic fungal plant pathogen Ustilago
RT maydis.";
RL Nature 444:97-101(2006).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=521 / FGSC 9021;
RA Gueldener U., Muensterkoetter M., Walter M.C., Mannhaupt G., Kahmann R.;
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Deaminates gamma-aminobutyric acid (GABA) to succinate-
CC semialdehyde, which in turn is converted to succinate by the succinate
CC semialdehyde dehydrogenase (By similarity). Not required for the
CC utilization of GABA as nitrogen source. {ECO:0000250,
CC ECO:0000269|PubMed:8598057}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=2-oxoglutarate + 4-aminobutanoate = L-glutamate + succinate
CC semialdehyde; Xref=Rhea:RHEA:23352, ChEBI:CHEBI:16810,
CC ChEBI:CHEBI:29985, ChEBI:CHEBI:57706, ChEBI:CHEBI:59888; EC=2.6.1.19;
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000250|UniProtKB:P17649};
CC -!- SUBUNIT: Homodimer. {ECO:0000250|UniProtKB:O13837}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- INDUCTION: Up-regulated by GABA and beta-alanine. Is not subject to
CC nitrogen catabolite repression. {ECO:0000269|PubMed:8598057}.
CC -!- SIMILARITY: Belongs to the class-III pyridoxal-phosphate-dependent
CC aminotransferase family. {ECO:0000305}.
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DR EMBL; U28655; AAA98560.1; -; Genomic_DNA.
DR EMBL; CM003141; KIS71171.1; -; Genomic_DNA.
DR PIR; S68116; S68116.
DR RefSeq; XP_011387041.1; XM_011388739.1.
DR AlphaFoldDB; P49604; -.
DR SMR; P49604; -.
DR STRING; 5270.UM01080P0; -.
DR PRIDE; P49604; -.
DR EnsemblFungi; KIS71171; KIS71171; UMAG_01080.
DR GeneID; 23562197; -.
DR KEGG; uma:UMAG_01080; -.
DR VEuPathDB; FungiDB:UMAG_01080; -.
DR eggNOG; KOG1405; Eukaryota.
DR HOGENOM; CLU_016922_12_0_1; -.
DR InParanoid; P49604; -.
DR OMA; DPPDMVT; -.
DR OrthoDB; 566705at2759; -.
DR Proteomes; UP000000561; Chromosome 2.
DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi.
DR GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR GO; GO:0003867; F:4-aminobutyrate transaminase activity; IBA:GO_Central.
DR GO; GO:0034386; F:4-aminobutyrate:2-oxoglutarate transaminase activity; IEA:UniProtKB-EC.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IBA:GO_Central.
DR GO; GO:0009450; P:gamma-aminobutyric acid catabolic process; IBA:GO_Central.
DR GO; GO:0006536; P:glutamate metabolic process; IEA:EnsemblFungi.
DR CDD; cd00610; OAT_like; 1.
DR Gene3D; 3.40.640.10; -; 1.
DR Gene3D; 3.90.1150.10; -; 1.
DR InterPro; IPR004631; 4NH2But_aminotransferase_euk.
DR InterPro; IPR005814; Aminotrans_3.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR015422; PyrdxlP-dep_Trfase_small.
DR Pfam; PF00202; Aminotran_3; 1.
DR PIRSF; PIRSF000521; Transaminase_4ab_Lys_Orn; 1.
DR SUPFAM; SSF53383; SSF53383; 1.
DR TIGRFAMs; TIGR00699; GABAtrns_euk; 1.
DR PROSITE; PS00600; AA_TRANSFER_CLASS_3; 1.
PE 2: Evidence at transcript level;
KW Aminotransferase; Cytoplasm; Pyridoxal phosphate; Reference proteome;
KW Transferase.
FT CHAIN 1..509
FT /note="4-aminobutyrate aminotransferase"
FT /id="PRO_0000120381"
FT BINDING 166..167
FT /ligand="pyridoxal 5'-phosphate"
FT /ligand_id="ChEBI:CHEBI:597326"
FT /ligand_note="ligand shared between dimeric partners"
FT /note="in other chain"
FT /evidence="ECO:0000250|UniProtKB:P80147"
FT BINDING 223
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:P80147"
FT BINDING 387
FT /ligand="pyridoxal 5'-phosphate"
FT /ligand_id="ChEBI:CHEBI:597326"
FT /ligand_note="ligand shared between dimeric partners"
FT /evidence="ECO:0000250|UniProtKB:P80147"
FT MOD_RES 363
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000250|UniProtKB:P80147"
FT CONFLICT 337
FT /note="G -> GT (in Ref. 1; AAA98560)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 509 AA; 55993 MW; 9ECAFAE83FE4DD4C CRC64;
MISSKATSAA RACARTSRVM QQQQRRLLAT VVSSSSLFPG EPSSPHVVTS QIPGPKSKEL
SDRIGTFQEN RTHGFVVDYA KSQGNWIADA DGNVLLDMFA QIASIAIGYN NPDLLALAKT
DEFITATMNR AALGSFPPTN WQELVETSFG TVKPDGLNNI FTAMCGSCAN ENAFKASFMA
YRARERGEKA EFTPEEMSSC MKNQSPGSPD LSILSFTSAF HGRLFGSLSA TRSKAIHKLD
IPSFNWPVVE WPDVKYPFAQ NSRENAEAEK VALAAVEEAI VSSKKTGSSY GPVAALIVEP
IQSEGGDNHA SPAFFQGLRD VTKKHGVFMI VDEVQTGVGA TGAFWAHSKW NLTSPPDFVT
FSKKMQAAGF YHNIETRPSL PYRNYNTWMG DPARTLQARQ IIRTIQDHNL IQKTDKVGNY
IYEKLFDLIE NGAGRGKIEK LRGENAGTFL AFDGRTAKVR DQLIMEMRKL GVHMGGCGDK
ALRLRPMLVF EQKHADIFLD KLETALGQL