GACD_DICDI
ID GACD_DICDI Reviewed; 514 AA.
AC Q54F80;
DT 28-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 24-MAY-2005, sequence version 1.
DT 25-MAY-2022, entry version 84.
DE RecName: Full=Rho GTPase-activating protein gacD;
DE AltName: Full=GTPase activating factor for raC protein D;
GN Name=gacD; ORFNames=DDB_G0291021;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
RN [2]
RP INDUCTION [LARGE SCALE ANALYSIS].
RX PubMed=18590548; DOI=10.1186/1471-2180-8-109;
RA Carilla-Latorre S., Calvo-Garrido J., Bloomfield G., Skelton J., Kay R.R.,
RA Ivens A., Martinez J.L., Escalante R.;
RT "Dictyostelium transcriptional responses to Pseudomonas aeruginosa: common
RT and specific effects from PAO1 and PA14 strains.";
RL BMC Microbiol. 8:109-109(2008).
CC -!- FUNCTION: Rho GTPase-activating protein involved in the signal
CC transduction pathway. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- INDUCTION: Down-regulated by Pseudomonas aeruginosa, PAO1 strain and
CC PA14 strain infection. {ECO:0000269|PubMed:18590548}.
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DR EMBL; AAFI02000174; EAL61941.1; -; Genomic_DNA.
DR RefSeq; XP_635457.1; XM_630365.1.
DR AlphaFoldDB; Q54F80; -.
DR SMR; Q54F80; -.
DR STRING; 44689.DDB0233876; -.
DR PaxDb; Q54F80; -.
DR EnsemblProtists; EAL61941; EAL61941; DDB_G0291021.
DR GeneID; 8627957; -.
DR KEGG; ddi:DDB_G0291021; -.
DR dictyBase; DDB_G0291021; gacD.
DR eggNOG; KOG1450; Eukaryota.
DR HOGENOM; CLU_530459_0_0_1; -.
DR InParanoid; Q54F80; -.
DR OMA; GVCFAPN; -.
DR PhylomeDB; Q54F80; -.
DR PRO; PR:Q54F80; -.
DR Proteomes; UP000002195; Chromosome 5.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005096; F:GTPase activator activity; IBA:GO_Central.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR Gene3D; 1.10.555.10; -; 1.
DR InterPro; IPR008936; Rho_GTPase_activation_prot.
DR InterPro; IPR000198; RhoGAP_dom.
DR Pfam; PF00620; RhoGAP; 1.
DR SMART; SM00324; RhoGAP; 1.
DR SUPFAM; SSF48350; SSF48350; 1.
DR PROSITE; PS50238; RHOGAP; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; GTPase activation; Reference proteome.
FT CHAIN 1..514
FT /note="Rho GTPase-activating protein gacD"
FT /id="PRO_0000380196"
FT DOMAIN 185..369
FT /note="Rho-GAP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00172"
FT REGION 1..46
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 61..91
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 105..156
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 401..446
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..21
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 105..141
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 401..421
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 422..446
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 514 AA; 56088 MW; D2377D73C557CF3E CRC64;
MSNPSKLSIS PPNTFQHVGG SNLHVNKPPA LQSPPRSPPL QHTTAQNNLA KSTSASNIAG
IANQTTPSSS GSSSGSSSLN SIGSLTKSTS NSNLNINHYS SGNATMGASL QSTNTGNTIT
QSSSPPSSSS STNNNNNVLP LPNKILHHPS PKKTTKSTII SGKLKRFFKS RPSRDSLYEK
HILSAPFSSA TLSFINIFKI ITALKKTNAI ETEGLFRVNG NAESVRSLWL MLNNVQEAIP
VDGNSSAHDL AGLLKLYLRE SKFPLVPLEL FTSPAVPATI DEARVFVEEK LPTENVRVLS
YLIEYLEQVS LKSSINKMNP IGLGVCFAPN ILRSVNTNPS NPQFQVHMTN IQSHCNFITL
LIENRLKIFK DSALSPVQGS NDDEILENLI IQSPDDELFD EQHQHEQELI DSSHEHHHSI
NNGDNNNNVD TSNVNGGSGD ENNQSNVIND TALYDEFISL LTDESLGSSQ KSVIIQRMTT
LFQTDGDRFK SFLRDMQIDG IISLLEYILT LDEN