GADE_ECO57
ID GADE_ECO57 Reviewed; 175 AA.
AC P63206; P29688;
DT 27-SEP-2004, integrated into UniProtKB/Swiss-Prot.
DT 27-SEP-2004, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=Transcriptional regulator GadE;
GN Name=gadE; OrderedLocusNames=Z4925, ECs4392;
OS Escherichia coli O157:H7.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83334;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=O157:H7 / EDL933 / ATCC 700927 / EHEC;
RX PubMed=11206551; DOI=10.1038/35054089;
RA Perna N.T., Plunkett G. III, Burland V., Mau B., Glasner J.D., Rose D.J.,
RA Mayhew G.F., Evans P.S., Gregor J., Kirkpatrick H.A., Posfai G.,
RA Hackett J., Klink S., Boutin A., Shao Y., Miller L., Grotbeck E.J.,
RA Davis N.W., Lim A., Dimalanta E.T., Potamousis K., Apodaca J.,
RA Anantharaman T.S., Lin J., Yen G., Schwartz D.C., Welch R.A.,
RA Blattner F.R.;
RT "Genome sequence of enterohaemorrhagic Escherichia coli O157:H7.";
RL Nature 409:529-533(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=O157:H7 / Sakai / RIMD 0509952 / EHEC;
RX PubMed=11258796; DOI=10.1093/dnares/8.1.11;
RA Hayashi T., Makino K., Ohnishi M., Kurokawa K., Ishii K., Yokoyama K.,
RA Han C.-G., Ohtsubo E., Nakayama K., Murata T., Tanaka M., Tobe T., Iida T.,
RA Takami H., Honda T., Sasakawa C., Ogasawara N., Yasunaga T., Kuhara S.,
RA Shiba T., Hattori M., Shinagawa H.;
RT "Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and
RT genomic comparison with a laboratory strain K-12.";
RL DNA Res. 8:11-22(2001).
RN [3]
RP FUNCTION.
RC STRAIN=O157:H7 / Sakai / RIMD 0509952 / EHEC;
RX PubMed=12704134; DOI=10.1128/iai.71.5.2598-2606.2003;
RA Tatsuno I., Nagano K., Taguchi K., Rong L., Mori H., Sasakawa C.;
RT "Increased adherence to Caco-2 cells caused by disruption of the yhiE and
RT yhiF genes in enterohemorrhagic Escherichia coli O157:H7.";
RL Infect. Immun. 71:2598-2606(2003).
CC -!- FUNCTION: Regulates the expression of several genes involved in acid
CC resistance. Required for the expression of gadA and gadBC, among
CC others, regardless of media or growth conditions. Binds directly to the
CC 20 bp GAD box found in the control regions of both loci (By
CC similarity). Could be involved in the regulation of the genes coding
CC for the type III secretion system in enterohaemorragic strains.
CC {ECO:0000250, ECO:0000269|PubMed:12704134}.
CC -!- INDUCTION: By acidic conditions. Could be induced by EvgA via the
CC induction of YdeO (By similarity). {ECO:0000250}.
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DR EMBL; AE005174; AAG58653.1; -; Genomic_DNA.
DR EMBL; BA000007; BAB37815.1; -; Genomic_DNA.
DR PIR; A86024; A86024.
DR PIR; H91177; H91177.
DR RefSeq; NP_312419.1; NC_002695.1.
DR RefSeq; WP_000576690.1; NZ_SWKA01000005.1.
DR AlphaFoldDB; P63206; -.
DR SMR; P63206; -.
DR STRING; 155864.EDL933_4762; -.
DR EnsemblBacteria; AAG58653; AAG58653; Z4925.
DR EnsemblBacteria; BAB37815; BAB37815; ECs_4392.
DR GeneID; 66672604; -.
DR GeneID; 915751; -.
DR KEGG; ece:Z4925; -.
DR KEGG; ecs:ECs_4392; -.
DR PATRIC; fig|386585.9.peg.4589; -.
DR eggNOG; COG2771; Bacteria.
DR HOGENOM; CLU_1522892_0_0_6; -.
DR OMA; INNISDM; -.
DR Proteomes; UP000000558; Chromosome.
DR Proteomes; UP000002519; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
DR InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR Pfam; PF00196; GerE; 1.
DR SUPFAM; SSF46894; SSF46894; 1.
DR PROSITE; PS50043; HTH_LUXR_2; 1.
PE 3: Inferred from homology;
KW Activator; DNA-binding; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..175
FT /note="Transcriptional regulator GadE"
FT /id="PRO_0000184157"
FT DOMAIN 109..174
FT /note="HTH luxR-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00411"
FT DNA_BIND 133..152
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00411"
SQ SEQUENCE 175 AA; 20599 MW; 5CCC69A0DA53B293 CRC64;
MIFLMTKDSF LLQGFWQLKD NHEMIKINSL SEIKKVGNKP FKVIIDTYHN HILDEEAIKF
LEKLDAERII VLAPYHISKL KAKAPIYFVS RKESIKNLLE ITYGKHLPHK NSQLCFSHNQ
FKIMQLILKN KNESNITSTL NISQQTLKIQ KFNIMYKLKL RRMSDIVTLG ITSYF