GADE_SHIFL
ID GADE_SHIFL Reviewed; 175 AA.
AC P63207; P29688;
DT 27-SEP-2004, integrated into UniProtKB/Swiss-Prot.
DT 27-SEP-2004, sequence version 1.
DT 25-MAY-2022, entry version 111.
DE RecName: Full=Transcriptional regulator GadE;
GN Name=gadE; OrderedLocusNames=SF3546, S4221;
OS Shigella flexneri.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Shigella.
OX NCBI_TaxID=623;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=301 / Serotype 2a;
RX PubMed=12384590; DOI=10.1093/nar/gkf566;
RA Jin Q., Yuan Z., Xu J., Wang Y., Shen Y., Lu W., Wang J., Liu H., Yang J.,
RA Yang F., Zhang X., Zhang J., Yang G., Wu H., Qu D., Dong J., Sun L.,
RA Xue Y., Zhao A., Gao Y., Zhu J., Kan B., Ding K., Chen S., Cheng H.,
RA Yao Z., He B., Chen R., Ma D., Qiang B., Wen Y., Hou Y., Yu J.;
RT "Genome sequence of Shigella flexneri 2a: insights into pathogenicity
RT through comparison with genomes of Escherichia coli K12 and O157.";
RL Nucleic Acids Res. 30:4432-4441(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700930 / 2457T / Serotype 2a;
RX PubMed=12704152; DOI=10.1128/iai.71.5.2775-2786.2003;
RA Wei J., Goldberg M.B., Burland V., Venkatesan M.M., Deng W., Fournier G.,
RA Mayhew G.F., Plunkett G. III, Rose D.J., Darling A., Mau B., Perna N.T.,
RA Payne S.M., Runyen-Janecky L.J., Zhou S., Schwartz D.C., Blattner F.R.;
RT "Complete genome sequence and comparative genomics of Shigella flexneri
RT serotype 2a strain 2457T.";
RL Infect. Immun. 71:2775-2786(2003).
CC -!- FUNCTION: Regulates the expression of several genes involved in acid
CC resistance. Required for the expression of gadA and gadBC, among
CC others, regardless of media or growth conditions. Binds directly to the
CC 20 bp GAD box found in the control regions of both loci (By
CC similarity). {ECO:0000250}.
CC -!- INDUCTION: By acidic conditions. Could be induced by EvgA via the
CC induction of YdeO (By similarity). {ECO:0000250}.
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DR EMBL; AE005674; AAN45001.2; -; Genomic_DNA.
DR EMBL; AE014073; AAP19185.1; -; Genomic_DNA.
DR RefSeq; NP_709294.2; NC_004337.2.
DR RefSeq; WP_000576690.1; NZ_WPGV01000129.1.
DR AlphaFoldDB; P63207; -.
DR SMR; P63207; -.
DR STRING; 198214.SF3546; -.
DR EnsemblBacteria; AAN45001; AAN45001; SF3546.
DR EnsemblBacteria; AAP19185; AAP19185; S4221.
DR GeneID; 1026396; -.
DR GeneID; 66672604; -.
DR KEGG; sfl:SF3546; -.
DR KEGG; sfx:S4221; -.
DR PATRIC; fig|198214.7.peg.4176; -.
DR HOGENOM; CLU_1522892_0_0_6; -.
DR OMA; INNISDM; -.
DR OrthoDB; 1579577at2; -.
DR Proteomes; UP000001006; Chromosome.
DR Proteomes; UP000002673; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
DR InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR Pfam; PF00196; GerE; 1.
DR SUPFAM; SSF46894; SSF46894; 1.
DR PROSITE; PS50043; HTH_LUXR_2; 1.
PE 3: Inferred from homology;
KW Activator; DNA-binding; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..175
FT /note="Transcriptional regulator GadE"
FT /id="PRO_0000184158"
FT DOMAIN 109..174
FT /note="HTH luxR-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00411"
FT DNA_BIND 133..152
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00411"
SQ SEQUENCE 175 AA; 20599 MW; 5CCC69A0DA53B293 CRC64;
MIFLMTKDSF LLQGFWQLKD NHEMIKINSL SEIKKVGNKP FKVIIDTYHN HILDEEAIKF
LEKLDAERII VLAPYHISKL KAKAPIYFVS RKESIKNLLE ITYGKHLPHK NSQLCFSHNQ
FKIMQLILKN KNESNITSTL NISQQTLKIQ KFNIMYKLKL RRMSDIVTLG ITSYF