GADX_ECO57
ID GADX_ECO57 Reviewed; 274 AA.
AC P58230;
DT 14-AUG-2001, integrated into UniProtKB/Swiss-Prot.
DT 14-AUG-2001, sequence version 1.
DT 03-AUG-2022, entry version 116.
DE RecName: Full=HTH-type transcriptional regulator GadX;
GN Name=gadX; OrderedLocusNames=Z4929, ECs4396;
OS Escherichia coli O157:H7.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83334;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=O157:H7 / EDL933 / ATCC 700927 / EHEC;
RX PubMed=11206551; DOI=10.1038/35054089;
RA Perna N.T., Plunkett G. III, Burland V., Mau B., Glasner J.D., Rose D.J.,
RA Mayhew G.F., Evans P.S., Gregor J., Kirkpatrick H.A., Posfai G.,
RA Hackett J., Klink S., Boutin A., Shao Y., Miller L., Grotbeck E.J.,
RA Davis N.W., Lim A., Dimalanta E.T., Potamousis K., Apodaca J.,
RA Anantharaman T.S., Lin J., Yen G., Schwartz D.C., Welch R.A.,
RA Blattner F.R.;
RT "Genome sequence of enterohaemorrhagic Escherichia coli O157:H7.";
RL Nature 409:529-533(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=O157:H7 / Sakai / RIMD 0509952 / EHEC;
RX PubMed=11258796; DOI=10.1093/dnares/8.1.11;
RA Hayashi T., Makino K., Ohnishi M., Kurokawa K., Ishii K., Yokoyama K.,
RA Han C.-G., Ohtsubo E., Nakayama K., Murata T., Tanaka M., Tobe T., Iida T.,
RA Takami H., Honda T., Sasakawa C., Ogasawara N., Yasunaga T., Kuhara S.,
RA Shiba T., Hattori M., Shinagawa H.;
RT "Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and
RT genomic comparison with a laboratory strain K-12.";
RL DNA Res. 8:11-22(2001).
CC -!- FUNCTION: Positively regulates the expression of about fifteen genes
CC involved in acid resistance such as gadA, gadB and gadC. Depending on
CC the conditions (growth phase and medium), can repress gadW (By
CC similarity). {ECO:0000250}.
CC -!- SUBUNIT: Homodimer. {ECO:0000250}.
CC -!- INDUCTION: Expression can be activated by RpoS and repressed by CRP, H-
CC NS and GadW, depending on the conditions. {ECO:0000250}.
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DR EMBL; AE005174; AAG58657.1; -; Genomic_DNA.
DR EMBL; BA000007; BAB37819.1; -; Genomic_DNA.
DR PIR; D91178; D91178.
DR PIR; E86024; E86024.
DR RefSeq; NP_312423.1; NC_002695.1.
DR RefSeq; WP_001191074.1; NZ_SWKA01000005.1.
DR AlphaFoldDB; P58230; -.
DR SMR; P58230; -.
DR STRING; 155864.EDL933_4767; -.
DR EnsemblBacteria; AAG58657; AAG58657; Z4929.
DR EnsemblBacteria; BAB37819; BAB37819; ECs_4396.
DR GeneID; 915747; -.
DR KEGG; ece:Z4929; -.
DR KEGG; ecs:ECs_4396; -.
DR PATRIC; fig|386585.9.peg.4595; -.
DR eggNOG; COG2207; Bacteria.
DR HOGENOM; CLU_091292_0_0_6; -.
DR OMA; NIANDWS; -.
DR Proteomes; UP000000558; Chromosome.
DR Proteomes; UP000002519; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR Pfam; PF12833; HTH_18; 1.
DR PRINTS; PR00032; HTHARAC.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 3: Inferred from homology;
KW Activator; DNA-binding; Reference proteome; Repressor; Transcription;
KW Transcription regulation.
FT CHAIN 1..274
FT /note="HTH-type transcriptional regulator GadX"
FT /id="PRO_0000194520"
FT DOMAIN 145..242
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00593"
FT DNA_BIND 162..183
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00593"
FT DNA_BIND 209..232
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00593"
SQ SEQUENCE 274 AA; 31372 MW; 1C2A626CE6886CDD CRC64;
MQSLHGNCLI AYARHKYILT MVNGEYRYFN GGDLVFADAS QIRVDKCVEN FVLVSRDTLS
LFLPMLKEEA LNLHAHKKVS SLLVHHCSRD IPVFQEVAQL SQNKNLRYAE MLRKRALIFA
LLSVFLEDDH FIPLLLNVLQ PNMRTRVCTV INNNIAHEWT LARIASELLM SPSLLKKKLR
EEETSYSQLL TECRMQRALQ LIVIHGFSIK RVAVSCGYHS VSYFIYVFRN YYGMTPTEYQ
ERSAQGLPNR DSAASIVAQG NFYGTDCSAE GIRL