GAG_AVIMA
ID GAG_AVIMA Reviewed; 124 AA.
AC P26315;
DT 01-MAY-1992, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1992, sequence version 1.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=Proteinase p15;
DE EC=3.4.23.-;
GN Name=gag;
OS Avian myeloblastosis associated virus (MAV).
OC Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC Ortervirales; Retroviridae; Orthoretrovirinae; Alpharetrovirus;
OC unclassified Alpharetrovirus.
OX NCBI_TaxID=11960;
OH NCBI_TaxID=8976; Galliformes.
RN [1]
RP NUCLEOTIDE SEQUENCE, AND PROTEIN SEQUENCE OF 1-8.
RX PubMed=1733789; DOI=10.1016/0020-711x(92)90252-v;
RA Pichova I., Strop P., Sedlacek J., Kapralek F., Benes V., Travnicek M.,
RA Pavlickova L., Soucek M., Kostka V., Foundling S.;
RT "Isolation, biochemical characterization and crystallization of the p15gag
RT proteinase of myeloblastosis associated virus expressed in E. coli.";
RL Int. J. Biochem. 24:235-242(1992).
RN [2]
RP PRELIMINARY PROTEIN SEQUENCE.
RX PubMed=6268146; DOI=10.1021/bi00516a018;
RA Sauer R.T., Allen D.W., Niall H.D.;
RT "Amino acid sequence of p15 from avian myeloblastosis virus complex.";
RL Biochemistry 20:3784-3791(1981).
RN [3]
RP SPECIFICITY STUDIES.
RX PubMed=2026269; DOI=10.1016/0014-5793(91)80447-b;
RA Konvalinka J., Blaha I., Skrabana R., Sedlacek J., Pichova I., Kapralek F.,
RA Kostka V., Strop P.;
RT "Subsite specificity of the proteinase from myeloblastosis associated
RT virus.";
RL FEBS Lett. 282:73-76(1991).
RN [4]
RP SPECIFICITY STUDIES.
RX PubMed=1849425; DOI=10.1021/bi00228a013;
RA Strop P., Konvalinka J., Stys D., Pavlickova L., Blaha I., Velek J.,
RA Travnicek M., Kostka V., Sedlacek J.;
RT "Specificity studies on retroviral proteinase from myeloblastosis-
RT associated virus.";
RL Biochemistry 30:3437-3443(1991).
RN [5]
RP X-RAY CRYSTALLOGRAPHY (2.2 ANGSTROMS).
RX PubMed=1332025; DOI=10.1002/prot.340140307;
RA Ohlendorf D.H., Foundling S.I., Wendoloski J.J., Sedlacek J., Strop P.,
RA Salemme F.R.;
RT "Structural studies of the retroviral proteinase from avian myeloblastosis
RT associated virus.";
RL Proteins 14:382-391(1992).
CC -!- FUNCTION: Specifically liberates the five major structural proteins
CC from the common gag precursor, as well as reverse transcriptase and
CC integrase from the gag-pol precursor.
CC -!- SUBUNIT: The protease is active as a homodimer.
CC -!- MISCELLANEOUS: This protein is synthesized as a Gag-Pol polyprotein.
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DR PDB; 1MVP; X-ray; 2.20 A; A/B=1-124.
DR PDBsum; 1MVP; -.
DR SMR; P26315; -.
DR BRENDA; 3.4.23.B13; 592.
DR EvolutionaryTrace; P26315; -.
DR GO; GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR CDD; cd05482; HIV_retropepsin_like; 1.
DR Gene3D; 2.40.70.10; -; 1.
DR InterPro; IPR001969; Aspartic_peptidase_AS.
DR InterPro; IPR001995; Peptidase_A2_cat.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR034170; Retropepsin-like_cat_dom.
DR InterPro; IPR018061; Retropepsins.
DR Pfam; PF00077; RVP; 1.
DR SUPFAM; SSF50630; SSF50630; 1.
DR PROSITE; PS50175; ASP_PROT_RETROV; 1.
DR PROSITE; PS00141; ASP_PROTEASE; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Aspartyl protease; Direct protein sequencing; Hydrolase;
KW Protease.
FT CHAIN 1..124
FT /note="Proteinase p15"
FT /id="PRO_0000199554"
FT DOMAIN 32..113
FT /note="Peptidase A2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00275"
FT ACT_SITE 37
FT STRAND 2..4
FT /evidence="ECO:0007829|PDB:1MVP"
FT STRAND 7..9
FT /evidence="ECO:0007829|PDB:1MVP"
FT STRAND 12..19
FT /evidence="ECO:0007829|PDB:1MVP"
FT STRAND 21..23
FT /evidence="ECO:0007829|PDB:1MVP"
FT STRAND 28..36
FT /evidence="ECO:0007829|PDB:1MVP"
FT STRAND 44..46
FT /evidence="ECO:0007829|PDB:1MVP"
FT TURN 47..49
FT /evidence="ECO:0007829|PDB:1MVP"
FT STRAND 56..58
FT /evidence="ECO:0007829|PDB:1MVP"
FT STRAND 74..78
FT /evidence="ECO:0007829|PDB:1MVP"
FT STRAND 80..85
FT /evidence="ECO:0007829|PDB:1MVP"
FT STRAND 95..97
FT /evidence="ECO:0007829|PDB:1MVP"
FT STRAND 100..102
FT /evidence="ECO:0007829|PDB:1MVP"
FT STRAND 105..109
FT /evidence="ECO:0007829|PDB:1MVP"
FT HELIX 111..116
FT /evidence="ECO:0007829|PDB:1MVP"
FT STRAND 120..122
FT /evidence="ECO:0007829|PDB:1MVP"
SQ SEQUENCE 124 AA; 13596 MW; 3B8FF451AF43BBB1 CRC64;
LAMTMEHKDR PLVRVILTNT GSHPVKQRSV YITALLDSGA DITIISEEDW PTDWPVMEAA
NPQIHGIGGG IPMRKSRDMI EVGVINRDGS LERPLLLFPA VAMVRGSILG RDCLQGLGLR
LTNL