GAR1_NEOFI
ID GAR1_NEOFI Reviewed; 209 AA.
AC A1CVY3;
DT 08-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 1.
DT 25-MAY-2022, entry version 81.
DE RecName: Full=H/ACA ribonucleoprotein complex subunit gar1;
DE AltName: Full=snoRNP protein GAR1;
GN Name=gar1; ORFNames=NFIA_102700;
OS Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164
OS / JCM 1740 / NRRL 181 / WB 181) (Aspergillus fischerianus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Fumigati.
OX NCBI_TaxID=331117;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181
RC / WB 181;
RX PubMed=18404212; DOI=10.1371/journal.pgen.1000046;
RA Fedorova N.D., Khaldi N., Joardar V.S., Maiti R., Amedeo P., Anderson M.J.,
RA Crabtree J., Silva J.C., Badger J.H., Albarraq A., Angiuoli S., Bussey H.,
RA Bowyer P., Cotty P.J., Dyer P.S., Egan A., Galens K., Fraser-Liggett C.M.,
RA Haas B.J., Inman J.M., Kent R., Lemieux S., Malavazi I., Orvis J.,
RA Roemer T., Ronning C.M., Sundaram J.P., Sutton G., Turner G., Venter J.C.,
RA White O.R., Whitty B.R., Youngman P., Wolfe K.H., Goldman G.H.,
RA Wortman J.R., Jiang B., Denning D.W., Nierman W.C.;
RT "Genomic islands in the pathogenic filamentous fungus Aspergillus
RT fumigatus.";
RL PLoS Genet. 4:E1000046-E1000046(2008).
CC -!- FUNCTION: Non-catalytic component of the H/ACA small nucleolar
CC ribonucleoprotein (H/ACA snoRNP), which catalyzes pseudouridylation of
CC rRNA and is required for ribosome biogenesis. This involves the
CC isomerization of uridine such that the ribose is subsequently attached
CC to C5, instead of the normal N1. Pseudouridine ('psi') residues may
CC serve to stabilize the conformation of rRNAs. The H/ACA snoRNP complex
CC also mediates pseudouridylation of other types of RNAs. The H/ACA
CC snoRNP complex mediates pseudouridylation at position 93 in U2 snRNA.
CC {ECO:0000250|UniProtKB:P28007}.
CC -!- SUBUNIT: Component of the small nucleolar ribonucleoprotein particles
CC containing H/ACA-type snoRNAs (H/ACA snoRNPs).
CC {ECO:0000250|UniProtKB:P28007}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000250|UniProtKB:P28007}.
CC -!- SIMILARITY: Belongs to the GAR1 family. {ECO:0000305}.
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DR EMBL; DS027685; EAW24785.1; -; Genomic_DNA.
DR RefSeq; XP_001266682.1; XM_001266681.1.
DR AlphaFoldDB; A1CVY3; -.
DR SMR; A1CVY3; -.
DR STRING; 36630.CADNFIAP00009349; -.
DR EnsemblFungi; EAW24785; EAW24785; NFIA_102700.
DR GeneID; 4594071; -.
DR KEGG; nfi:NFIA_102700; -.
DR VEuPathDB; FungiDB:NFIA_102700; -.
DR eggNOG; KOG3262; Eukaryota.
DR HOGENOM; CLU_080002_1_0_1; -.
DR OMA; HSCEGEM; -.
DR OrthoDB; 1530008at2759; -.
DR Proteomes; UP000006702; Unassembled WGS sequence.
DR GO; GO:0031429; C:box H/ACA snoRNP complex; IEA:EnsemblFungi.
DR GO; GO:0034513; F:box H/ACA snoRNA binding; IEA:EnsemblFungi.
DR GO; GO:0000454; P:snoRNA guided rRNA pseudouridine synthesis; IEA:EnsemblFungi.
DR GO; GO:0031120; P:snRNA pseudouridine synthesis; IEA:EnsemblFungi.
DR Gene3D; 2.40.10.230; -; 1.
DR InterPro; IPR038664; Gar1/Naf1_Cbf5-bd_sf.
DR InterPro; IPR007504; H/ACA_rnp_Gar1/Naf1.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR Pfam; PF04410; Gar1; 1.
DR SUPFAM; SSF50447; SSF50447; 1.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome; Repeat; Ribonucleoprotein;
KW Ribosome biogenesis; RNA-binding; rRNA processing.
FT CHAIN 1..209
FT /note="H/ACA ribonucleoprotein complex subunit gar1"
FT /id="PRO_0000327530"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 4..29
FT /note="RGG-box 1"
FT REGION 125..209
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 144..203
FT /note="RGG-box 2"
SQ SEQUENCE 209 AA; 21047 MW; F9332E3F34FD8657 CRC64;
MSFRGGGRGG FASGANRGGN FGGRGGRGGF QAQTGPPAQV LEMGTFMHAC EGEMVCESVN
PKIPYFNAPI YLENKTPIGK VDEVLGPINQ VYFTIKPQEG IVATSFKPGD KVYIGGDKLL
PLEKFLPKPK PPPGSKPKKA VGGRGGFARG GARGGRGAPR GGRGGAPRGR GGPRGGGFGG
GSFGGGGFRG GSRGGGRGGP RGGSGGFRR