GAT11_ARATH
ID GAT11_ARATH Reviewed; 303 AA.
AC Q6DBP8; Q9LN07;
DT 10-MAY-2005, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 117.
DE RecName: Full=GATA transcription factor 11;
GN Name=GATA11; OrderedLocusNames=At1g08010; ORFNames=T6D22.28;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Kim C.J., Chen H., Cheuk R.F., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY ORGANIZATION.
RX PubMed=15084732; DOI=10.1104/pp.103.037788;
RA Reyes J.C., Muro-Pastor M.I., Florencio F.J.;
RT "The GATA family of transcription factors in Arabidopsis and rice.";
RL Plant Physiol. 134:1718-1732(2004).
CC -!- FUNCTION: Transcriptional activator that specifically binds 5'-GATA-3'
CC or 5'-GAT-3' motifs within gene promoters. May be involved in the
CC regulation of some light-responsive genes (By similarity).
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the type IV zinc-finger family. Class A
CC subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF79843.1; Type=Erroneous gene model prediction; Note=The predicted gene At1g08000 has been split into 2 genes: At1g08000 and At1g08010.; Evidence={ECO:0000305};
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DR EMBL; AC026875; AAF79843.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE28228.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE28229.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM58513.1; -; Genomic_DNA.
DR EMBL; BT014974; AAT70425.1; -; mRNA.
DR EMBL; BT015713; AAU45211.1; -; mRNA.
DR RefSeq; NP_001077485.1; NM_001084016.2.
DR RefSeq; NP_001320942.1; NM_001331749.1.
DR RefSeq; NP_172279.1; NM_100675.4.
DR AlphaFoldDB; Q6DBP8; -.
DR SMR; Q6DBP8; -.
DR BioGRID; 22557; 3.
DR IntAct; Q6DBP8; 3.
DR STRING; 3702.AT1G08010.1; -.
DR PaxDb; Q6DBP8; -.
DR PRIDE; Q6DBP8; -.
DR ProteomicsDB; 247388; -.
DR EnsemblPlants; AT1G08010.1; AT1G08010.1; AT1G08010.
DR EnsemblPlants; AT1G08010.2; AT1G08010.2; AT1G08010.
DR EnsemblPlants; AT1G08010.3; AT1G08010.3; AT1G08010.
DR GeneID; 837316; -.
DR Gramene; AT1G08010.1; AT1G08010.1; AT1G08010.
DR Gramene; AT1G08010.2; AT1G08010.2; AT1G08010.
DR Gramene; AT1G08010.3; AT1G08010.3; AT1G08010.
DR KEGG; ath:AT1G08010; -.
DR Araport; AT1G08010; -.
DR TAIR; locus:2205100; AT1G08010.
DR eggNOG; KOG1601; Eukaryota.
DR HOGENOM; CLU_045755_2_1_1; -.
DR InParanoid; Q6DBP8; -.
DR OMA; FFILECT; -.
DR OrthoDB; 1008475at2759; -.
DR PhylomeDB; Q6DBP8; -.
DR PRO; PR:Q6DBP8; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q6DBP8; baseline and differential.
DR Genevisible; Q6DBP8; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0030154; P:cell differentiation; IBA:GO_Central.
DR CDD; cd00202; ZnF_GATA; 1.
DR Gene3D; 3.30.50.10; -; 1.
DR InterPro; IPR000679; Znf_GATA.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR Pfam; PF00320; GATA; 1.
DR SMART; SM00401; ZnF_GATA; 1.
DR PROSITE; PS00344; GATA_ZN_FINGER_1; 1.
DR PROSITE; PS50114; GATA_ZN_FINGER_2; 1.
PE 2: Evidence at transcript level;
KW Activator; DNA-binding; Metal-binding; Nucleus; Reference proteome;
KW Transcription; Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..303
FT /note="GATA transcription factor 11"
FT /id="PRO_0000083435"
FT ZN_FING 216..270
FT /note="GATA-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00094"
FT REGION 131..189
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 303 AA; 33839 MW; AC8BB0A95841B207 CRC64;
MNWLPEAEAE DDFKGLLSGD FFDDLINHLD VPLDDIDTTN GEGDWVDRFQ DLEPPPMDMF
PTLPSDLTSC GSGMAKAPRV DIQRNIPALK QSYSSEALSS TLHQSSAPPE IKVSKLFQSL
SPVSVLENSY GSLSTHNNGS QRLAFPVKGM RSKRKRPTTL RLSYLFPSEP RKPEKSTPGK
PESECYFSSE QHAKKKRKIH LTTRTVSSTL EASNSDGIVR KCTHCETTKT PQWREGPSGP
KTLCNACGVR FRSGRLVPEY RPASSPTFIP AVHSNSHRKI IEMRRKDDEQ FDSSMIRAVI
SRG
