GAT15_ORYSI
ID GAT15_ORYSI Reviewed; 277 AA.
AC B8AX51;
DT 15-FEB-2017, integrated into UniProtKB/Swiss-Prot.
DT 03-MAR-2009, sequence version 1.
DT 25-MAY-2022, entry version 58.
DE RecName: Full=GATA transcription factor 15 {ECO:0000305};
DE AltName: Full=Protein NECK LEAF 1 {ECO:0000305};
GN Name=GATA15 {ECO:0000305}; Synonyms=NL1 {ECO:0000305};
GN ORFNames=OsI_21119 {ECO:0000312|EMBL:EEC79747.1};
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
CC -!- FUNCTION: Probable transcription factor that regulates organogenesis
CC during transition from the vegetative to the reproductive phase.
CC Regulates the expression of CYP78A11/PLA1, HD3A and MADS1 during
CC reproductive development in rice. May act upstream of CYP78A11/PLA1
CC during panicle development. Acts independently of the photoperiodic and
CC gibberellin signaling pathways. {ECO:0000250|UniProtKB:Q6L5E5}.
CC -!- SIMILARITY: Belongs to the type IV zinc-finger family. Class B
CC subfamily. {ECO:0000305}.
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DR EMBL; CM000130; EEC79747.1; -; Genomic_DNA.
DR AlphaFoldDB; B8AX51; -.
DR STRING; 39946.B8AX51; -.
DR EnsemblPlants; BGIOSGA020424-TA; BGIOSGA020424-PA; BGIOSGA020424.
DR Gramene; BGIOSGA020424-TA; BGIOSGA020424-PA; BGIOSGA020424.
DR HOGENOM; CLU_062129_0_0_1; -.
DR OMA; RRCCANC; -.
DR Proteomes; UP000007015; Chromosome 5.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0048437; P:floral organ development; IEA:EnsemblPlants.
DR GO; GO:0048510; P:regulation of timing of transition from vegetative to reproductive phase; IEA:EnsemblPlants.
DR CDD; cd00202; ZnF_GATA; 1.
DR Gene3D; 3.30.50.10; -; 1.
DR InterPro; IPR044272; GATA18/19/20.
DR InterPro; IPR000679; Znf_GATA.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR PANTHER; PTHR46813; PTHR46813; 1.
DR Pfam; PF00320; GATA; 1.
DR SMART; SM00401; ZnF_GATA; 1.
DR PROSITE; PS00344; GATA_ZN_FINGER_1; 1.
DR PROSITE; PS50114; GATA_ZN_FINGER_2; 1.
PE 3: Inferred from homology;
KW DNA-binding; Flowering; Metal-binding; Reference proteome; Transcription;
KW Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..277
FT /note="GATA transcription factor 15"
FT /id="PRO_0000439006"
FT ZN_FING 154..179
FT /note="GATA-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00094"
FT REGION 52..94
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 52..84
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 277 AA; 28177 MW; 4E1ED74F37739526 CRC64;
MLHHYYSGGA GHHQDVAAAG SPGDMASSTF SLFFPMSNGQ CWPPSTVEES AAYDDHSTVT
TSPSSPSSSS TGSVDCTLSL GTPSSRRAEP VAAAAPAANH GAPVPAHYPS LSAATVSWDA
TAESYYCGQQ GRPATGAAKC AAGAGHDALL DRRCANCGTA STPLWRNGPR GPKSLCNACG
IRYKKEERRA AATTTTADGA AGCGFITAQR GRGSTAAKAA PAVTTCGEET SPYVVGGGGG
EVANAAYLAW RLNVVPPAAT ATAFSVWPER ASLYHYN