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GAT16_ARATH
ID   GAT16_ARATH             Reviewed;         139 AA.
AC   Q9FJ10; A0JPW8;
DT   10-MAY-2005, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2001, sequence version 1.
DT   03-AUG-2022, entry version 122.
DE   RecName: Full=GATA transcription factor 16;
GN   Name=GATA16; OrderedLocusNames=At5g49300; ORFNames=K21P3.18;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10048488; DOI=10.1093/dnares/5.6.379;
RA   Asamizu E., Sato S., Kaneko T., Nakamura Y., Kotani H., Miyajima N.,
RA   Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. VIII. Sequence
RT   features of the regions of 1,081,958 bp covered by seventeen physically
RT   assigned P1 and TAC clones.";
RL   DNA Res. 5:379-391(1998).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RA   Bautista V.R., Kim C.J., Chen H., Quinitio C., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   GENE FAMILY ORGANIZATION.
RX   PubMed=15084732; DOI=10.1104/pp.103.037788;
RA   Reyes J.C., Muro-Pastor M.I., Florencio F.J.;
RT   "The GATA family of transcription factors in Arabidopsis and rice.";
RL   Plant Physiol. 134:1718-1732(2004).
CC   -!- FUNCTION: Transcriptional regulator that specifically binds 5'-GATA-3'
CC       or 5'-GAT-3' motifs within gene promoters. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the type IV zinc-finger family. Class B
CC       subfamily. {ECO:0000305}.
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DR   EMBL; AB016872; BAB10348.1; -; Genomic_DNA.
DR   EMBL; CP002688; AED95794.1; -; Genomic_DNA.
DR   EMBL; BT029338; ABK32152.1; -; mRNA.
DR   RefSeq; NP_199741.1; NM_124307.3.
DR   AlphaFoldDB; Q9FJ10; -.
DR   SMR; Q9FJ10; -.
DR   BioGRID; 20236; 6.
DR   IntAct; Q9FJ10; 4.
DR   STRING; 3702.AT5G49300.1; -.
DR   PaxDb; Q9FJ10; -.
DR   PRIDE; Q9FJ10; -.
DR   EnsemblPlants; AT5G49300.1; AT5G49300.1; AT5G49300.
DR   GeneID; 834990; -.
DR   Gramene; AT5G49300.1; AT5G49300.1; AT5G49300.
DR   KEGG; ath:AT5G49300; -.
DR   Araport; AT5G49300; -.
DR   TAIR; locus:2155919; AT5G49300.
DR   eggNOG; KOG1601; Eukaryota.
DR   HOGENOM; CLU_060197_1_1_1; -.
DR   InParanoid; Q9FJ10; -.
DR   OMA; RKNEKCC; -.
DR   OrthoDB; 1480372at2759; -.
DR   PhylomeDB; Q9FJ10; -.
DR   PRO; PR:Q9FJ10; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q9FJ10; baseline and differential.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR   GO; GO:0000976; F:transcription cis-regulatory region binding; IPI:TAIR.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   CDD; cd00202; ZnF_GATA; 1.
DR   Gene3D; 3.30.50.10; -; 1.
DR   InterPro; IPR000679; Znf_GATA.
DR   InterPro; IPR013088; Znf_NHR/GATA.
DR   Pfam; PF00320; GATA; 1.
DR   SMART; SM00401; ZnF_GATA; 1.
DR   PROSITE; PS00344; GATA_ZN_FINGER_1; 1.
DR   PROSITE; PS50114; GATA_ZN_FINGER_2; 1.
PE   2: Evidence at transcript level;
KW   DNA-binding; Metal-binding; Nucleus; Reference proteome; Transcription;
KW   Transcription regulation; Zinc; Zinc-finger.
FT   CHAIN           1..139
FT                   /note="GATA transcription factor 16"
FT                   /id="PRO_0000083452"
FT   ZN_FING         32..86
FT                   /note="GATA-type"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00094"
FT   REGION          67..98
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        69..84
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   139 AA;  15322 MW;  DD96F95DEDC680BA CRC64;
     MLDHSEKVLL VDSETMKTRA EDMIEQNNTS VNDKKKTCAD CGTSKTPLWR GGPVGPKSLC
     NACGIRNRKK RRGGTEDNKK LKKSSSGGGN RKFGESLKQS LMDLGIRKRS TVEKQRQKLG
     EEEQAAVLLM ALSYGSVYA
 
 
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