GAT27_ARATH
ID GAT27_ARATH Reviewed; 470 AA.
AC Q5PP38; Q9LTB5;
DT 10-MAY-2005, integrated into UniProtKB/Swiss-Prot.
DT 04-JAN-2005, sequence version 1.
DT 03-AUG-2022, entry version 108.
DE RecName: Full=GATA transcription factor 27;
GN Name=GATA27; OrderedLocusNames=At5g47140; ORFNames=K14A3.9;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Cheuk R.F., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY ORGANIZATION.
RX PubMed=15084732; DOI=10.1104/pp.103.037788;
RA Reyes J.C., Muro-Pastor M.I., Florencio F.J.;
RT "The GATA family of transcription factors in Arabidopsis and rice.";
RL Plant Physiol. 134:1718-1732(2004).
CC -!- FUNCTION: Transcriptional regulator that specifically binds 5'-GATA-3'
CC or 5'-GAT-3' motifs within gene promoters. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the type IV zinc-finger family. Class D
CC subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAA98109.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AB025609; BAA98109.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED95475.1; -; Genomic_DNA.
DR EMBL; BT020259; AAV84480.1; -; mRNA.
DR EMBL; BT020450; AAW30028.1; -; mRNA.
DR RefSeq; NP_199525.2; NM_124085.5.
DR AlphaFoldDB; Q5PP38; -.
DR SMR; Q5PP38; -.
DR BioGRID; 20008; 3.
DR IntAct; Q5PP38; 3.
DR STRING; 3702.AT5G47140.1; -.
DR PaxDb; Q5PP38; -.
DR PRIDE; Q5PP38; -.
DR ProteomicsDB; 230481; -.
DR EnsemblPlants; AT5G47140.1; AT5G47140.1; AT5G47140.
DR GeneID; 834760; -.
DR Gramene; AT5G47140.1; AT5G47140.1; AT5G47140.
DR KEGG; ath:AT5G47140; -.
DR Araport; AT5G47140; -.
DR TAIR; locus:2151987; AT5G47140.
DR eggNOG; KOG1601; Eukaryota.
DR HOGENOM; CLU_034415_0_0_1; -.
DR InParanoid; Q5PP38; -.
DR OMA; ANLEFHT; -.
DR OrthoDB; 779391at2759; -.
DR PhylomeDB; Q5PP38; -.
DR PRO; PR:Q5PP38; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q5PP38; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd00202; ZnF_GATA; 1.
DR Gene3D; 3.30.50.10; -; 1.
DR InterPro; IPR028020; ASX_DEUBAD_dom.
DR InterPro; IPR044867; DEUBAD_dom.
DR InterPro; IPR044589; GATA26/27.
DR InterPro; IPR000679; Znf_GATA.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR PANTHER; PTHR46855; PTHR46855; 1.
DR Pfam; PF13919; ASXH; 1.
DR Pfam; PF00320; GATA; 1.
DR SMART; SM00401; ZnF_GATA; 1.
DR PROSITE; PS51916; DEUBAD; 1.
DR PROSITE; PS00344; GATA_ZN_FINGER_1; 1.
DR PROSITE; PS50114; GATA_ZN_FINGER_2; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Metal-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..470
FT /note="GATA transcription factor 27"
FT /id="PRO_0000083458"
FT DOMAIN 250..359
FT /note="DEUBAD"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01264"
FT ZN_FING 1..55
FT /note="GATA-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00094"
SQ SEQUENCE 470 AA; 52601 MW; DA9CF32A8D14C575 CRC64;
MGKQGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG SLVNYTPLHA RAEGDETEIE
DHRTQTVMIK GMSLNKKIPK RKPYQENFTV KRANLEFHTG FKRKALDEEA SNRSSSGSVV
SNSESCAQSN AWDSTFPCKR RTCVGRPKAA SSVEKLTKDL YTILQEQQSS CLSGTSEEDL
LFENETPMLL GHGSVLMRDP HSGAREEESE ASSLLVESSK SSSVHSVKFG GKAMKQEQVK
RSKSQVLGRH SSLLCSIDLK DVFNFDEFIE NFTEEEQQKL MKLLPQVDSV DRPDSLRSMF
ESSQFKENLS LFQQLVADGV FETNSSYAKL EDIKTLAKLA LSDPNKSHLL ESYYMLKRRE
IEDCVTTTSR VSSLSPSNNN SLVTIERPCE SLNQNFSETR GVMRSPKEVM KIRSKHTEEN
LENSVSSFKP VSCGGPLVFS YEDNDISDQD LLLDVPSNGS FPQAELLNMI