GATA1_ARATH
ID GATA1_ARATH Reviewed; 274 AA.
AC Q8LAU9; O49740;
DT 26-APR-2005, integrated into UniProtKB/Swiss-Prot.
DT 26-APR-2005, sequence version 2.
DT 03-AUG-2022, entry version 123.
DE RecName: Full=GATA transcription factor 1;
DE Short=AtGATA-1;
GN Name=GATA1; OrderedLocusNames=At3g24050; ORFNames=F14O13.24;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AND TISSUE SPECIFICITY.
RC STRAIN=cv. Columbia;
RX PubMed=12139008; DOI=10.1023/a:1016062325584;
RA Teakle G.R., Manfield I.W., Graham J.F., Gilmartin P.M.;
RT "Arabidopsis thaliana GATA factors: organisation, expression and DNA-
RT binding characteristics.";
RL Plant Mol. Biol. 50:43-57(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY ORGANIZATION.
RX PubMed=15084732; DOI=10.1104/pp.103.037788;
RA Reyes J.C., Muro-Pastor M.I., Florencio F.J.;
RT "The GATA family of transcription factors in Arabidopsis and rice.";
RL Plant Physiol. 134:1718-1732(2004).
CC -!- FUNCTION: Transcriptional activator that specifically binds 5'-GATA-3'
CC or 5'-GAT-3' motifs within gene promoters. May be involved in the
CC regulation of some light-responsive genes.
CC {ECO:0000269|PubMed:12139008}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Mostly expressed in roots. Also expressed in stems,
CC flowers and leaves. {ECO:0000269|PubMed:12139008}.
CC -!- SIMILARITY: Belongs to the type IV zinc-finger family. Class A
CC subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAM65139.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; Y13648; CAA73999.1; -; mRNA.
DR EMBL; AP001297; BAB03023.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE76848.1; -; Genomic_DNA.
DR EMBL; AY087597; AAM65139.1; ALT_INIT; mRNA.
DR PIR; T52103; T52103.
DR RefSeq; NP_189047.1; NM_113310.4.
DR AlphaFoldDB; Q8LAU9; -.
DR SMR; Q8LAU9; -.
DR STRING; 3702.AT3G24050.1; -.
DR PaxDb; Q8LAU9; -.
DR PRIDE; Q8LAU9; -.
DR ProteomicsDB; 230445; -.
DR EnsemblPlants; AT3G24050.1; AT3G24050.1; AT3G24050.
DR GeneID; 821990; -.
DR Gramene; AT3G24050.1; AT3G24050.1; AT3G24050.
DR KEGG; ath:AT3G24050; -.
DR Araport; AT3G24050; -.
DR TAIR; locus:2076191; AT3G24050.
DR eggNOG; KOG1601; Eukaryota.
DR HOGENOM; CLU_045755_4_1_1; -.
DR InParanoid; Q8LAU9; -.
DR OMA; AACFMVD; -.
DR OrthoDB; 1206415at2759; -.
DR PhylomeDB; Q8LAU9; -.
DR PRO; PR:Q8LAU9; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q8LAU9; baseline and differential.
DR Genevisible; Q8LAU9; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IDA:TAIR.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0030154; P:cell differentiation; IBA:GO_Central.
DR GO; GO:0007623; P:circadian rhythm; IEP:TAIR.
DR CDD; cd00202; ZnF_GATA; 1.
DR Gene3D; 3.30.50.10; -; 1.
DR InterPro; IPR000679; Znf_GATA.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR Pfam; PF00320; GATA; 1.
DR SMART; SM00401; ZnF_GATA; 1.
DR PROSITE; PS00344; GATA_ZN_FINGER_1; 1.
DR PROSITE; PS50114; GATA_ZN_FINGER_2; 1.
PE 2: Evidence at transcript level;
KW Activator; DNA-binding; Metal-binding; Nucleus; Reference proteome;
KW Transcription; Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..274
FT /note="GATA transcription factor 1"
FT /id="PRO_0000083430"
FT ZN_FING 190..244
FT /note="GATA-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00094"
FT REGION 1..39
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 102..132
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 152..159
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000255"
FT CONFLICT 62
FT /note="E -> Q (in Ref. 4; AAM65139)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 274 AA; 30114 MW; 0FE6D71EEE52C5AD CRC64;
MEMESFMDDL LNFSVPEEEE DDDEHTQPPR NITRRKTGLR PTDSFGLFNT DDLGVVEEED
LEWISNKNAF PVIETFVGVL PSEHFPITSL LEREATEVKQ LSPVSVLETS SHSSTTTTSN
SSGGSNGSTA VATTTTTPTI MSCCVGFKAP AKARSKRRRT GRRDLRVLWT GNEQGGIQKK
KTMTVAAAAL IMGRKCQHCG AEKTPQWRAG PAGPKTLCNA CGVRYKSGRL VPEYRPANSP
TFTAELHSNS HRKIVEMRKQ YQSGDGDGDR KDCG
