GBLPB_ORYSJ
ID GBLPB_ORYSJ Reviewed; 336 AA.
AC Q6L4F8; A0A0P0WQK4;
DT 11-JAN-2011, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 115.
DE RecName: Full=Guanine nucleotide-binding protein subunit beta-like protein B;
DE Short=GPB-LR;
DE AltName: Full=Receptor for activated C kinase 1B;
GN Name=RACK1B; OrderedLocusNames=Os05g0552300, LOC_Os05g47890;
GN ORFNames=OsJ_19467, OSJNBa0079H23.13, P0560C03.18;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT "A fine physical map of the rice chromosome 5.";
RL Mol. Genet. Genomics 274:337-345(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [7]
RP SUBUNIT.
RX PubMed=18723578; DOI=10.1105/tpc.107.054395;
RA Nakashima A., Chen L., Thao N.P., Fujiwara M., Wong H.L., Kuwano M.,
RA Umemura K., Shirasu K., Kawasaki T., Shimamoto K.;
RT "RACK1 functions in rice innate immunity by interacting with the Rac1
RT immune complex.";
RL Plant Cell 20:2265-2279(2008).
CC -!- FUNCTION: Component of the RACK1 regulatory proteins that play a role
CC in multiple signal transduction pathways. {ECO:0000250}.
CC -!- SUBUNIT: Homodimer and heterodimer with RACK1A.
CC {ECO:0000305|PubMed:18723578}.
CC -!- SIMILARITY: Belongs to the WD repeat G protein beta family. Ribosomal
CC protein RACK1 subfamily. {ECO:0000305}.
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DR EMBL; AC129717; AAT85192.1; -; Genomic_DNA.
DR EMBL; AC135925; AAT39277.1; -; Genomic_DNA.
DR EMBL; AP008211; BAF18168.1; -; Genomic_DNA.
DR EMBL; AP014961; BAS95226.1; -; Genomic_DNA.
DR EMBL; CM000142; EEE64615.1; -; Genomic_DNA.
DR EMBL; AK062179; BAG88240.1; -; mRNA.
DR EMBL; AK065272; BAG89443.1; -; mRNA.
DR EMBL; AK121567; BAH00554.1; -; mRNA.
DR RefSeq; XP_015640003.1; XM_015784517.1.
DR AlphaFoldDB; Q6L4F8; -.
DR SMR; Q6L4F8; -.
DR STRING; 4530.OS05T0552300-02; -.
DR CarbonylDB; Q6L4F8; -.
DR PaxDb; Q6L4F8; -.
DR PRIDE; Q6L4F8; -.
DR EnsemblPlants; Os05t0552300-02; Os05t0552300-02; Os05g0552300.
DR GeneID; 4339539; -.
DR Gramene; Os05t0552300-02; Os05t0552300-02; Os05g0552300.
DR KEGG; osa:4339539; -.
DR eggNOG; KOG0279; Eukaryota.
DR HOGENOM; CLU_000288_57_7_1; -.
DR InParanoid; Q6L4F8; -.
DR OMA; CKAMLWD; -.
DR OrthoDB; 805365at2759; -.
DR Proteomes; UP000000763; Chromosome 5.
DR Proteomes; UP000007752; Chromosome 5.
DR Proteomes; UP000059680; Chromosome 5.
DR Genevisible; Q6L4F8; OS.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0005080; F:protein kinase C binding; IBA:GO_Central.
DR GO; GO:0043022; F:ribosome binding; IBA:GO_Central.
DR GO; GO:0001934; P:positive regulation of protein phosphorylation; IBA:GO_Central.
DR GO; GO:0072344; P:rescue of stalled ribosome; IBA:GO_Central.
DR GO; GO:0007165; P:signal transduction; IEA:UniProtKB-KW.
DR Gene3D; 2.130.10.10; -; 1.
DR InterPro; IPR045223; Asc1/RACK1.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR19868; PTHR19868; 1.
DR Pfam; PF00400; WD40; 7.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 5.
DR PROSITE; PS50082; WD_REPEATS_2; 6.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 1: Evidence at protein level;
KW Reference proteome; Repeat; Ribonucleoprotein; Ribosomal protein;
KW Transducer; WD repeat.
FT CHAIN 1..336
FT /note="Guanine nucleotide-binding protein subunit beta-like
FT protein B"
FT /id="PRO_0000403656"
FT REPEAT 15..55
FT /note="WD 1"
FT REPEAT 74..113
FT /note="WD 2"
FT REPEAT 116..155
FT /note="WD 3"
FT REPEAT 164..205
FT /note="WD 4"
FT REPEAT 208..247
FT /note="WD 5"
FT REPEAT 249..287
FT /note="WD 6"
FT REPEAT 297..336
FT /note="WD 7"
SQ SEQUENCE 336 AA; 36452 MW; FFA92428B4FDD3AB CRC64;
MAGQESLTLA GVLRGHNDMV TAIAAPIDNS PFIVSSSRDK SLLVWDITNP STAVATDPEA
APPEYGVSYR RLTGHSHFVQ DVVLSSDGQF ALSGSWDGEL RLWDLATGRT TRRFVGHTKD
VLSVAFSVDN RQIVSAARDN TIKLWNTLGE CKYTIGGDHG AGEGHTGWVS CVRFSPNPMA
PTIVSGSWDR SVKVWNLTNC KLRTKLEGHN GYVNAVAVSP DGSLCASGGK DGTTLLWDLT
EGKMLYKLDA GAIIHSLCFS PNRYWLCAAT EDSVKIWDLE SKLVMQDLKP EVQAFKSQML
YCTSLSWSAD GSTLFAGYTD GTIRVWKVSG FGGYAI
