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GBRL2_HUMAN
ID   GBRL2_HUMAN             Reviewed;         117 AA.
AC   P60520; O08765; Q6FG91; Q9DCP8; Q9UQF7;
DT   01-MAR-2004, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2004, sequence version 1.
DT   03-AUG-2022, entry version 168.
DE   RecName: Full=Gamma-aminobutyric acid receptor-associated protein-like 2;
DE   AltName: Full=GABA(A) receptor-associated protein-like 2;
DE   AltName: Full=Ganglioside expression factor 2;
DE            Short=GEF-2;
DE   AltName: Full=General protein transport factor p16;
DE   AltName: Full=Golgi-associated ATPase enhancer of 16 kDa;
DE            Short=GATE-16;
DE   AltName: Full=MAP1 light chain 3-related protein;
DE   Flags: Precursor;
GN   Name=GABARAPL2; Synonyms=FLC3A, GEF2;
OS   Homo sapiens (Human).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
OX   NCBI_TaxID=9606;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, AND INTERACTION WITH ULK1.
RC   TISSUE=Frontal cortex;
RX   PubMed=11146101; DOI=10.1016/s0169-328x(00)00218-7;
RA   Okazaki N., Yan J., Yuasa S., Ueno T., Kominami E., Masuho Y., Koga H.,
RA   Muramatsu M.-A.;
RT   "Interaction of the Unc-51-like kinase and microtubule-associated protein
RT   light chain 3 related proteins in the brain: possible role of vesicular
RT   transport in axonal elongation.";
RL   Brain Res. Mol. Brain Res. 85:1-12(2000).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [MRNA], AND TISSUE SPECIFICITY.
RX   PubMed=11414770; DOI=10.1006/geno.2001.6555;
RA   Xin Y., Yu L., Chen Z., Zheng L., Fu Q., Jiang J., Zhang P., Gong R.,
RA   Zhao S.;
RT   "Cloning, expression patterns, and chromosome localization of three human
RT   and two mouse homologues of GABA(A) receptor-associated protein.";
RL   Genomics 74:408-413(2001).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RA   Storch S., Braulke T.;
RL   Submitted (AUG-1998) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RC   TISSUE=Pituitary;
RA   Song H., Peng Y., Yu Y., Fu G., Mao M., Zhang Q., Zhu H., Li G., Luo M.,
RA   Chen J., Hu R.;
RT   "Human GEF2 homolog gene.";
RL   Submitted (JUL-1998) to the EMBL/GenBank/DDBJ databases.
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA   Halleck A., Ebert L., Mkoundinya M., Schick M., Eisenstein S., Neubert P.,
RA   Kstrang K., Schatten R., Shen B., Henze S., Mar W., Korn B., Zuo D., Hu Y.,
RA   LaBaer J.;
RT   "Cloning of human full open reading frames in Gateway(TM) system entry
RT   vector (pDONR201).";
RL   Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Brain;
RX   PubMed=14702039; DOI=10.1038/ng1285;
RA   Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
RA   Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
RA   Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
RA   Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
RA   Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H.,
RA   Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M.,
RA   Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K.,
RA   Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T.,
RA   Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M.,
RA   Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S.,
RA   Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H.,
RA   Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K.,
RA   Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N.,
RA   Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
RA   Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
RA   Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
RA   Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
RA   Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y.,
RA   Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K.,
RA   Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T.,
RA   Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T.,
RA   Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y.,
RA   Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H.,
RA   Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y.,
RA   Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H.,
RA   Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O.,
RA   Isogai T., Sugano S.;
RT   "Complete sequencing and characterization of 21,243 full-length human
RT   cDNAs.";
RL   Nat. Genet. 36:40-45(2004).
RN   [7]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M.,
RA   Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J.,
RA   Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S.,
RA   Turner R., Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H.,
RA   Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K.,
RA   Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D.,
RA   Hunkapiller M.W., Myers E.W., Venter J.C.;
RL   Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
RN   [8]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Brain, and Testis;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [9]
RP   INTERACTION WITH ATG7.
RX   PubMed=11096062; DOI=10.1074/jbc.c000752200;
RA   Tanida I., Tanida-Miyake E., Ueno T., Kominami E.;
RT   "The human homolog of Saccharomyces cerevisiae Apg7p is a Protein-
RT   activating enzyme for multiple substrates including human Apg12p, GATE-16,
RT   GABARAP, and MAP-LC3.";
RL   J. Biol. Chem. 276:1701-1706(2001).
RN   [10]
RP   INTERACTION WITH ATG3.
RX   PubMed=11825910; DOI=10.1074/jbc.m200385200;
RA   Tanida I., Tanida-Miyake E., Komatsu M., Ueno T., Kominami E.;
RT   "Human Apg3p/Aut1p homologue is an authentic E2 enzyme for multiple
RT   substrates, GATE-16, GABARAP, and MAP-LC3, and facilitates the conjugation
RT   of hApg12p to hApg5p.";
RL   J. Biol. Chem. 277:13739-13744(2002).
RN   [11]
RP   LIPIDATION AT GLY-116, INTERACTION WITH ATG3 AND ATG7, AND SUBCELLULAR
RP   LOCATION.
RX   PubMed=12507496; DOI=10.1016/s0006-291x(02)02907-8;
RA   Tanida I., Komatsu M., Ueno T., Kominami E.;
RT   "GATE-16 and GABARAP are authentic modifiers mediated by Apg7 and Apg3.";
RL   Biochem. Biophys. Res. Commun. 300:637-644(2003).
RN   [12]
RP   CLEAVAGE, SUBCELLULAR LOCATION, AND MUTAGENESIS OF GLY-116.
RX   PubMed=15169837; DOI=10.1242/jcs.01131;
RA   Kabeya Y., Mizushima N., Yamamoto A., Oshitani-Okamoto S., Ohsumi Y.,
RA   Yoshimori T.;
RT   "LC3, GABARAP and GATE16 localize to autophagosomal membrane depending on
RT   form-II formation.";
RL   J. Cell Sci. 117:2805-2812(2004).
RN   [13]
RP   INTERACTION WITH SQSTM1, AND SUBCELLULAR LOCATION.
RX   PubMed=17580304; DOI=10.1074/jbc.m702824200;
RA   Pankiv S., Clausen T.H., Lamark T., Brech A., Bruun J.A., Outzen H.,
RA   Overvatn A., Bjorkoy G., Johansen T.;
RT   "p62/SQSTM1 binds directly to Atg8/LC3 to facilitate degradation of
RT   ubiquitinated protein aggregates by autophagy.";
RL   J. Biol. Chem. 282:24131-24145(2007).
RN   [14]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-39, AND IDENTIFICATION BY
RP   MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Embryonic kidney;
RX   PubMed=17525332; DOI=10.1126/science.1140321;
RA   Matsuoka S., Ballif B.A., Smogorzewska A., McDonald E.R. III, Hurov K.E.,
RA   Luo J., Bakalarski C.E., Zhao Z., Solimini N., Lerenthal Y., Shiloh Y.,
RA   Gygi S.P., Elledge S.J.;
RT   "ATM and ATR substrate analysis reveals extensive protein networks
RT   responsive to DNA damage.";
RL   Science 316:1160-1166(2007).
RN   [15]
RP   SUBCELLULAR LOCATION, AND INTERACTION WITH TP53INP2.
RX   PubMed=19056683; DOI=10.1091/mbc.e08-07-0671;
RA   Nowak J., Archange C., Tardivel-Lacombe J., Pontarotti P., Pebusque M.J.,
RA   Vaccaro M.I., Velasco G., Dagorn J.C., Iovanna J.L.;
RT   "The TP53INP2 protein is required for autophagy in mammalian cells.";
RL   Mol. Biol. Cell 20:870-881(2009).
RN   [16]
RP   ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-24, AND IDENTIFICATION BY MASS
RP   SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=19608861; DOI=10.1126/science.1175371;
RA   Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T.C.,
RA   Olsen J.V., Mann M.;
RT   "Lysine acetylation targets protein complexes and co-regulates major
RT   cellular functions.";
RL   Science 325:834-840(2009).
RN   [17]
RP   CLEAVAGE BY ATG4B.
RX   PubMed=20818167; DOI=10.4161/auto.6.7.13075;
RA   Shu C.W., Drag M., Bekes M., Zhai D., Salvesen G.S., Reed J.C.;
RT   "Synthetic substrates for measuring activity of autophagy proteases:
RT   autophagins (Atg4).";
RL   Autophagy 6:936-947(2010).
RN   [18]
RP   FUNCTION.
RX   PubMed=20418806; DOI=10.1038/emboj.2010.74;
RA   Weidberg H., Shvets E., Shpilka T., Shimron F., Shinder V., Elazar Z.;
RT   "LC3 and GATE-16/GABARAP subfamilies are both essential yet act differently
RT   in autophagosome biogenesis.";
RL   EMBO J. 29:1792-1802(2010).
RN   [19]
RP   INTERACTION WITH TECPR2.
RX   PubMed=20562859; DOI=10.1038/nature09204;
RA   Behrends C., Sowa M.E., Gygi S.P., Harper J.W.;
RT   "Network organization of the human autophagy system.";
RL   Nature 466:68-76(2010).
RN   [20]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=21269460; DOI=10.1186/1752-0509-5-17;
RA   Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T.,
RA   Bennett K.L., Superti-Furga G., Colinge J.;
RT   "Initial characterization of the human central proteome.";
RL   BMC Syst. Biol. 5:17-17(2011).
RN   [21]
RP   INTERACTION WITH TBC1D25.
RX   PubMed=21383079; DOI=10.1083/jcb.201008107;
RA   Itoh T., Kanno E., Uemura T., Waguri S., Fukuda M.;
RT   "OATL1, a novel autophagosome-resident Rab33B-GAP, regulates autophagosomal
RT   maturation.";
RL   J. Cell Biol. 192:839-853(2011).
RN   [22]
RP   INTERACTION WITH TP53INP1.
RX   PubMed=22421968; DOI=10.1038/cdd.2012.30;
RA   Seillier M., Peuget S., Gayet O., Gauthier C., N'guessan P., Monte M.,
RA   Carrier A., Iovanna J.L., Dusetti N.J.;
RT   "TP53INP1, a tumor suppressor, interacts with LC3 and ATG8-family proteins
RT   through the LC3-interacting region (LIR) and promotes autophagy-dependent
RT   cell death.";
RL   Cell Death Differ. 19:1525-1535(2012).
RN   [23]
RP   INTERACTION WITH ATG13 AND ULK1.
RX   PubMed=23043107; DOI=10.1074/jbc.m112.378109;
RA   Alemu E.A., Lamark T., Torgersen K.M., Birgisdottir A.B., Larsen K.B.,
RA   Jain A., Olsvik H., Overvatn A., Kirkin V., Johansen T.;
RT   "ATG8 family proteins act as scaffolds for assembly of the ULK complex:
RT   sequence requirements for LC3-interacting region (LIR) motifs.";
RL   J. Biol. Chem. 287:39275-39290(2012).
RN   [24]
RP   INTERACTION WITH TBC1D5.
RX   PubMed=22354992; DOI=10.1128/mcb.06717-11;
RA   Popovic D., Akutsu M., Novak I., Harper J.W., Behrends C., Dikic I.;
RT   "Rab GTPase-activating proteins in autophagy: regulation of endocytic and
RT   autophagy pathways by direct binding to human ATG8 modifiers.";
RL   Mol. Cell. Biol. 32:1733-1744(2012).
RN   [25]
RP   IDENTIFICATION BY MASS SPECTROMETRY, AND SUBCELLULAR LOCATION.
RX   PubMed=22311637; DOI=10.1074/mcp.m111.014035;
RA   Dengjel J., Hoyer-Hansen M., Nielsen M.O., Eisenberg T., Harder L.M.,
RA   Schandorff S., Farkas T., Kirkegaard T., Becker A.C., Schroeder S.,
RA   Vanselow K., Lundberg E., Nielsen M.M., Kristensen A.R., Akimov V.,
RA   Bunkenborg J., Madeo F., Jaattela M., Andersen J.S.;
RT   "Identification of autophagosome-associated proteins and regulators by
RT   quantitative proteomic analysis and genetic screens.";
RL   Mol. Cell. Proteomics 11:M111.014035.1-M111.014035.17(2012).
RN   [26]
RP   INTERACTION WITH TP53INP1 AND TP53INP2.
RX   PubMed=22470510; DOI=10.1371/journal.pone.0034034;
RA   Sancho A., Duran J., Garcia-Espana A., Mauvezin C., Alemu E.A., Lamark T.,
RA   Macias M.J., Desalle R., Royo M., Sala D., Chicote J.U., Palacin M.,
RA   Johansen T., Zorzano A.;
RT   "DOR/Tp53inp2 and Tp53inp1 constitute a metazoan gene family encoding dual
RT   regulators of autophagy and transcription.";
RL   PLoS ONE 7:E34034-E34034(2012).
RN   [27]
RP   INTERACTION WITH BNIP3, AND FUNCTION.
RX   PubMed=23209295; DOI=10.1074/jbc.m112.399345;
RA   Zhu Y., Massen S., Terenzio M., Lang V., Chen-Lindner S., Eils R.,
RA   Novak I., Dikic I., Hamacher-Brady A., Brady N.R.;
RT   "Modulation of serines 17 and 24 in the LC3-interacting region of Bnip3
RT   determines pro-survival mitophagy versus apoptosis.";
RL   J. Biol. Chem. 288:1099-1113(2013).
RN   [28]
RP   INTERACTION WITH PCM1.
RX   PubMed=24089205; DOI=10.1038/nature12606;
RA   Tang Z., Lin M.G., Stowe T.R., Chen S., Zhu M., Stearns T., Franco B.,
RA   Zhong Q.;
RT   "Autophagy promotes primary ciliogenesis by removing OFD1 from centriolar
RT   satellites.";
RL   Nature 502:254-257(2013).
RN   [29]
RP   INTERACTION WITH TRIM5.
RX   PubMed=25127057; DOI=10.1016/j.devcel.2014.06.013;
RA   Mandell M.A., Jain A., Arko-Mensah J., Chauhan S., Kimura T., Dinkins C.,
RA   Silvestri G., Munch J., Kirchhoff F., Simonsen A., Wei Y., Levine B.,
RA   Johansen T., Deretic V.;
RT   "TRIM proteins regulate autophagy and can target autophagic substrates by
RT   direct recognition.";
RL   Dev. Cell 30:394-409(2014).
RN   [30]
RP   INTERACTION WITH WDFY3.
RX   PubMed=24668264; DOI=10.1002/embr.201338003;
RA   Lystad A.H., Ichimura Y., Takagi K., Yang Y., Pankiv S., Kanegae Y.,
RA   Kageyama S., Suzuki M., Saito I., Mizushima T., Komatsu M., Simonsen A.;
RT   "Structural determinants in GABARAP required for the selective binding and
RT   recruitment of ALFY to LC3B-positive structures.";
RL   EMBO Rep. 15:557-565(2014).
RN   [31]
RP   INTERACTION WITH MEFV AND TRIM21.
RX   PubMed=26347139; DOI=10.1083/jcb.201503023;
RA   Kimura T., Jain A., Choi S.W., Mandell M.A., Schroder K., Johansen T.,
RA   Deretic V.;
RT   "TRIM-mediated precision autophagy targets cytoplasmic regulators of innate
RT   immunity.";
RL   J. Cell Biol. 210:973-989(2015).
RN   [32]
RP   INTERACTION WITH KBTBD6 AND KBTBD7.
RX   PubMed=25684205; DOI=10.1016/j.molcel.2014.12.040;
RA   Genau H.M., Huber J., Baschieri F., Akutsu M., Doetsch V., Farhan H.,
RA   Rogov V., Behrends C.;
RT   "CUL3-KBTBD6/KBTBD7 ubiquitin ligase cooperates with GABARAP proteins to
RT   spatially restrict TIAM1-RAC1 signaling.";
RL   Mol. Cell 57:995-1010(2015).
RN   [33]
RP   INTERACTION WITH UBA5.
RX   PubMed=26929408; DOI=10.1074/jbc.m116.715474;
RA   Habisov S., Huber J., Ichimura Y., Akutsu M., Rogova N., Loehr F.,
RA   McEwan D.G., Johansen T., Dikic I., Doetsch V., Komatsu M., Rogov V.V.,
RA   Kirkin V.;
RT   "Structural and functional analysis of a novel interaction motif within
RT   UFM1-activating enzyme 5 (UBA5) required for binding to ubiquitin-like
RT   proteins and ufmylation.";
RL   J. Biol. Chem. 291:9025-9041(2016).
RN   [34]
RP   PROTEOLYTIC CLEAVAGE, DELIPIDATION, AND LIPIDATION AT GLY-116.
RX   PubMed=29458288; DOI=10.1080/15548627.2018.1437341;
RA   Kauffman K.J., Yu S., Jin J., Mugo B., Nguyen N., O'Brien A., Nag S.,
RA   Lystad A.H., Melia T.J.;
RT   "Delipidation of mammalian Atg8-family proteins by each of the four ATG4
RT   proteases.";
RL   Autophagy 14:992-1010(2018).
RN   [35]
RP   PROTEOLYTIC CLEAVAGE.
RX   PubMed=30661429; DOI=10.1080/15548627.2019.1569925;
RA   Agrotis A., Pengo N., Burden J.J., Ketteler R.;
RT   "Redundancy of human ATG4 protease isoforms in autophagy and LC3/GABARAP
RT   processing revealed in cells.";
RL   Autophagy 15:976-997(2019).
RN   [36]
RP   DECONJUGATION BY LEGIONELLA RAVZ (MICROBIAL INFECTION).
RX   PubMed=31722778; DOI=10.5483/bmbrep.2019.52.12.211;
RA   Park S.W., Jun Y.W., Jeon P., Lee Y.K., Park J.H., Lee S.H., Lee J.A.,
RA   Jang D.J.;
RT   "LIR motifs and the membrane-targeting domain are complementary in the
RT   function of RavZ.";
RL   BMB Rep. 52:700-705(2019).
RN   [37]
RP   PHOSPHORYLATION AT SER-87 AND SER-88, LIPIDATION AT GLY-116, SUBCELLULAR
RP   LOCATION, AND MUTAGENESIS OF 87-SER-SER-88 AND SER-88.
RX   PubMed=31709703; DOI=10.15252/embr.201948317;
RA   Herhaus L., Bhaskara R.M., Lystad A.H., Gestal-Mato U.,
RA   Covarrubias-Pinto A., Bonn F., Simonsen A., Hummer G., Dikic I.;
RT   "TBK1-mediated phosphorylation of LC3C and GABARAP-L2 controls
RT   autophagosome shedding by ATG4 protease.";
RL   EMBO Rep. 21:e48317-e48317(2020).
RN   [38]
RP   LIPIDATION AT GLY-116.
RX   PubMed=33909989; DOI=10.1016/j.molcel.2021.03.020;
RA   Durgan J., Lystad A.H., Sloan K., Carlsson S.R., Wilson M.I., Marcassa E.,
RA   Ulferts R., Webster J., Lopez-Clavijo A.F., Wakelam M.J., Beale R.,
RA   Simonsen A., Oxley D., Florey O.;
RT   "Non-canonical autophagy drives alternative ATG8 conjugation to
RT   phosphatidylserine.";
RL   Mol. Cell 81:2031-2040(2021).
RN   [39] {ECO:0007744|PDB:6H8C}
RP   STRUCTURE BY NMR OF 1-116 IN COMPLEX WITH UBA5, INTERACTION WITH UBA5,
RP   SUBCELLULAR LOCATION, AND MUTAGENESIS OF ARG-47.
RX   PubMed=30990354; DOI=10.1080/15548627.2019.1606637;
RA   Huber J., Obata M., Gruber J., Akutsu M., Lohr F., Rogova N., Guntert P.,
RA   Dikic I., Kirkin V., Komatsu M., Dotsch V., Rogov V.V.;
RT   "An atypical LIR motif within UBA5 (ubiquitin like modifier activating
RT   enzyme 5) interacts with GABARAP proteins and mediates membrane
RT   localization of UBA5.";
RL   Autophagy 16:256-270(2020).
CC   -!- FUNCTION: Ubiquitin-like modifier involved in intra-Golgi traffic (By
CC       similarity). Modulates intra-Golgi transport through coupling between
CC       NSF activity and SNAREs activation (By similarity). It first stimulates
CC       the ATPase activity of NSF which in turn stimulates the association
CC       with GOSR1 (By similarity). Involved in autophagy (PubMed:20418806,
CC       PubMed:23209295). Plays a role in mitophagy which contributes to
CC       regulate mitochondrial quantity and quality by eliminating the
CC       mitochondria to a basal level to fulfill cellular energy requirements
CC       and preventing excess ROS production (PubMed:20418806,
CC       PubMed:23209295). Whereas LC3s are involved in elongation of the
CC       phagophore membrane, the GABARAP/GATE-16 subfamily is essential for a
CC       later stage in autophagosome maturation (PubMed:20418806,
CC       PubMed:23209295). {ECO:0000250|UniProtKB:P60519,
CC       ECO:0000269|PubMed:20418806, ECO:0000269|PubMed:23209295}.
CC   -!- SUBUNIT: Monomer. Interacts with ATG3, ATG7, ATG13 and ULK1
CC       (PubMed:11146101, PubMed:11825910, PubMed:11096062, PubMed:12507496,
CC       PubMed:23043107). Interacts with TP53INP1 and TP53INP2
CC       (PubMed:19056683, PubMed:22421968, PubMed:22470510). Interacts with
CC       TBC1D25 (PubMed:21383079). Directly interacts with SQSTM1 and BNIP3
CC       (PubMed:17580304, PubMed:23209295). Interacts with TECPR2 and PCM1
CC       (PubMed:20562859, PubMed:24089205). Interacts with TBC1D5
CC       (PubMed:22354992). Interacts with TRIM5 (PubMed:25127057). Interacts
CC       with MEFV and TRIM21 (PubMed:26347139). Interacts with WDFY3
CC       (PubMed:24668264). Interacts with UBA5; promoting recruitment of UBA5
CC       to the endoplasmic reticulum membrane (PubMed:26929408,
CC       PubMed:30990354). Interacts with GOSR1 (By similarity). Interacts with
CC       KBTBD6 AND KBTBD7; the interaction is direct (PubMed:25684205).
CC       {ECO:0000250|UniProtKB:P60519, ECO:0000269|PubMed:11096062,
CC       ECO:0000269|PubMed:11146101, ECO:0000269|PubMed:11825910,
CC       ECO:0000269|PubMed:12507496, ECO:0000269|PubMed:17580304,
CC       ECO:0000269|PubMed:19056683, ECO:0000269|PubMed:20562859,
CC       ECO:0000269|PubMed:21383079, ECO:0000269|PubMed:22354992,
CC       ECO:0000269|PubMed:22421968, ECO:0000269|PubMed:22470510,
CC       ECO:0000269|PubMed:23043107, ECO:0000269|PubMed:23209295,
CC       ECO:0000269|PubMed:24089205, ECO:0000269|PubMed:24668264,
CC       ECO:0000269|PubMed:25127057, ECO:0000269|PubMed:25684205,
CC       ECO:0000269|PubMed:26347139, ECO:0000269|PubMed:26929408,
CC       ECO:0000269|PubMed:30990354}.
CC   -!- INTERACTION:
CC       P60520; Q6RW13: AGTRAP; NbExp=3; IntAct=EBI-720116, EBI-741181;
CC       P60520; Q8IVF2-2: AHNAK2; NbExp=3; IntAct=EBI-720116, EBI-10217765;
CC       P60520; Q9P2R3: ANKFY1; NbExp=2; IntAct=EBI-720116, EBI-2513908;
CC       P60520; Q8N6T3: ARFGAP1; NbExp=3; IntAct=EBI-720116, EBI-716933;
CC       P60520; Q8N6T3-2: ARFGAP1; NbExp=3; IntAct=EBI-720116, EBI-6288865;
CC       P60520; O75143: ATG13; NbExp=3; IntAct=EBI-720116, EBI-2798775;
CC       P60520; Q676U5: ATG16L1; NbExp=2; IntAct=EBI-720116, EBI-535909;
CC       P60520; Q2TAZ0: ATG2A; NbExp=2; IntAct=EBI-720116, EBI-2514077;
CC       P60520; Q9NT62: ATG3; NbExp=5; IntAct=EBI-720116, EBI-988094;
CC       P60520; Q9Y4P1: ATG4B; NbExp=10; IntAct=EBI-720116, EBI-712014;
CC       P60520; O95352: ATG7; NbExp=7; IntAct=EBI-720116, EBI-987834;
CC       P60520; Q9BXK5: BCL2L13; NbExp=4; IntAct=EBI-720116, EBI-747430;
CC       P60520; O60238: BNIP3L; NbExp=3; IntAct=EBI-720116, EBI-849893;
CC       P60520; Q9NW68: BSDC1; NbExp=3; IntAct=EBI-720116, EBI-721848;
CC       P60520; Q9P1Z2: CALCOCO1; NbExp=3; IntAct=EBI-720116, EBI-749920;
CC       P60520; Q13137: CALCOCO2; NbExp=7; IntAct=EBI-720116, EBI-739580;
CC       P60520; Q8WXU2: DNAAF4; NbExp=2; IntAct=EBI-720116, EBI-2946907;
CC       P60520; P63167: DYNLL1; NbExp=3; IntAct=EBI-720116, EBI-349105;
CC       P60520; Q96FJ2: DYNLL2; NbExp=3; IntAct=EBI-720116, EBI-742371;
CC       P60520; P00533: EGFR; NbExp=3; IntAct=EBI-720116, EBI-297353;
CC       P60520; Q8IVP5: FUNDC1; NbExp=4; IntAct=EBI-720116, EBI-3059266;
CC       P60520; Q9BQS8: FYCO1; NbExp=2; IntAct=EBI-720116, EBI-2869338;
CC       P60520; P40939: HADHA; NbExp=4; IntAct=EBI-720116, EBI-356720;
CC       P60520; P54257: HAP1; NbExp=3; IntAct=EBI-720116, EBI-712814;
CC       P60520; Q2T9L4: INSYN1; NbExp=3; IntAct=EBI-720116, EBI-4311436;
CC       P60520; O00410: IPO5; NbExp=5; IntAct=EBI-720116, EBI-356424;
CC       P60520; Q8N6L0: KASH5; NbExp=3; IntAct=EBI-720116, EBI-749265;
CC       P60520; Q86V97: KBTBD6; NbExp=2; IntAct=EBI-720116, EBI-2514778;
CC       P60520; Q8WVZ9: KBTBD7; NbExp=3; IntAct=EBI-720116, EBI-473695;
CC       P60520; Q8N8K9: KIAA1958; NbExp=7; IntAct=EBI-720116, EBI-10181113;
CC       P60520; Q96L93-6: KIF16B; NbExp=3; IntAct=EBI-720116, EBI-10988217;
CC       P60520; P60409: KRTAP10-7; NbExp=6; IntAct=EBI-720116, EBI-10172290;
CC       P60520; P60411: KRTAP10-9; NbExp=3; IntAct=EBI-720116, EBI-10172052;
CC       P60520; Q8N653: LZTR1; NbExp=3; IntAct=EBI-720116, EBI-2350056;
CC       P60520; Q9UH92: MLX; NbExp=5; IntAct=EBI-720116, EBI-741109;
CC       P60520; Q9UH92-3: MLX; NbExp=3; IntAct=EBI-720116, EBI-8852072;
CC       P60520; Q14596: NBR1; NbExp=11; IntAct=EBI-720116, EBI-742698;
CC       P60520; P46934: NEDD4; NbExp=6; IntAct=EBI-720116, EBI-726944;
CC       P60520; P46934-3: NEDD4; NbExp=3; IntAct=EBI-720116, EBI-11980721;
CC       P60520; Q8TD19: NEK9; NbExp=7; IntAct=EBI-720116, EBI-1044009;
CC       P60520; O75323: NIPSNAP2; NbExp=6; IntAct=EBI-720116, EBI-307133;
CC       P60520; Q9NV35: NUDT15; NbExp=3; IntAct=EBI-720116, EBI-3924801;
CC       P60520; Q9H4L5: OSBPL3; NbExp=3; IntAct=EBI-720116, EBI-1051317;
CC       P60520; Q15154: PCM1; NbExp=2; IntAct=EBI-720116, EBI-741421;
CC       P60520; Q9NS23: RASSF1; NbExp=2; IntAct=EBI-720116, EBI-367363;
CC       P60520; Q8WWW0: RASSF5; NbExp=2; IntAct=EBI-720116, EBI-367390;
CC       P60520; Q14257: RCN2; NbExp=6; IntAct=EBI-720116, EBI-356710;
CC       P60520; Q9H6L5-1: RETREG1; NbExp=2; IntAct=EBI-720116, EBI-16159046;
CC       P60520; Q9H6L5-2: RETREG1; NbExp=3; IntAct=EBI-720116, EBI-13382642;
CC       P60520; Q86VR2: RETREG3; NbExp=3; IntAct=EBI-720116, EBI-10192441;
CC       P60520; Q8IZE3-2: SCYL3; NbExp=3; IntAct=EBI-720116, EBI-11959369;
CC       P60520; Q9H0K1: SIK2; NbExp=3; IntAct=EBI-720116, EBI-1181664;
CC       P60520; Q13501: SQSTM1; NbExp=21; IntAct=EBI-720116, EBI-307104;
CC       P60520; O95210: STBD1; NbExp=5; IntAct=EBI-720116, EBI-2947137;
CC       P60520; Q13188: STK3; NbExp=2; IntAct=EBI-720116, EBI-992580;
CC       P60520; Q13043: STK4; NbExp=2; IntAct=EBI-720116, EBI-367376;
CC       P60520; Q86VP1: TAX1BP1; NbExp=3; IntAct=EBI-720116, EBI-529518;
CC       P60520; Q8TC07: TBC1D15; NbExp=2; IntAct=EBI-720116, EBI-1048247;
CC       P60520; Q3MII6: TBC1D25; NbExp=4; IntAct=EBI-720116, EBI-11899977;
CC       P60520; Q9UPU7: TBC1D2B; NbExp=3; IntAct=EBI-720116, EBI-2947180;
CC       P60520; B9A6K1: TBC1D5; NbExp=3; IntAct=EBI-720116, EBI-10217641;
CC       P60520; Q92609: TBC1D5; NbExp=5; IntAct=EBI-720116, EBI-742381;
CC       P60520; Q66K14-2: TBC1D9B; NbExp=3; IntAct=EBI-720116, EBI-10217736;
CC       P60520; O15040: TECPR2; NbExp=2; IntAct=EBI-720116, EBI-2946991;
CC       P60520; Q9Y6I9: TEX264; NbExp=3; IntAct=EBI-720116, EBI-10329860;
CC       P60520; Q15025: TNIP1; NbExp=6; IntAct=EBI-720116, EBI-357849;
CC       P60520; Q96A56: TP53INP1; NbExp=6; IntAct=EBI-720116, EBI-9986117;
CC       P60520; Q9H8W5-2: TRIM45; NbExp=3; IntAct=EBI-720116, EBI-11993364;
CC       P60520; Q969E8: TSR2; NbExp=11; IntAct=EBI-720116, EBI-746981;
CC       P60520; Q9GZZ9: UBA5; NbExp=17; IntAct=EBI-720116, EBI-747805;
CC       P60520; O75385: ULK1; NbExp=3; IntAct=EBI-720116, EBI-908831;
CC       P60520; Q8IZQ1: WDFY3; NbExp=3; IntAct=EBI-720116, EBI-1569256;
CC       P60520; Q8N680: ZBTB2; NbExp=3; IntAct=EBI-720116, EBI-2515601;
CC       P60520; Q6NX45: ZNF774; NbExp=3; IntAct=EBI-720116, EBI-10251462;
CC       P60520; Q9Z2F7: Bnip3l; Xeno; NbExp=2; IntAct=EBI-720116, EBI-1774669;
CC   -!- SUBCELLULAR LOCATION: Cytoplasmic vesicle, autophagosome
CC       {ECO:0000269|PubMed:12507496, ECO:0000269|PubMed:15169837,
CC       ECO:0000269|PubMed:17580304, ECO:0000269|PubMed:19056683,
CC       ECO:0000269|PubMed:22311637, ECO:0000269|PubMed:31709703}. Endoplasmic
CC       reticulum membrane {ECO:0000269|PubMed:30990354}. Golgi apparatus
CC       {ECO:0000250|UniProtKB:P60519}.
CC   -!- TISSUE SPECIFICITY: Ubiquitous. Expressed at high levels in the brain,
CC       heart, prostate, ovary, spleen and skeletal muscle. Expressed at very
CC       low levels in lung, thymus and small intestine.
CC       {ECO:0000269|PubMed:11146101, ECO:0000269|PubMed:11414770}.
CC   -!- PTM: The precursor molecule is cleaved by ATG4 (ATG4A, ATG4B, ATG4C or
CC       ATG4D) to expose the glycine at the C-terminus and form the cytosolic
CC       form, GABARAPL2-I (PubMed:15169837, PubMed:20818167, PubMed:30661429,
CC       PubMed:31709703). The processed form is then activated by APG7L/ATG7,
CC       transferred to ATG3 and conjugated to phosphatidylethanolamine (PE)
CC       phospholipid to form the membrane-bound form, GABARAPL2-II
CC       (PubMed:15169837, PubMed:31709703). During non-canonical autophagy, the
CC       processed form is conjugated to phosphatidylserine (PS) phospholipid
CC       (PubMed:33909989). ATG4 proteins also mediate the delipidation of PE-
CC       conjugated forms required for GABARAPL2 recycling when autophagosomes
CC       fuse with lysosomes (PubMed:29458288, PubMed:31709703,
CC       PubMed:33909989). In addition, ATG4B and ATG4D mediate delipidation of
CC       ATG8 proteins conjugated to PS during non-canonical autophagy
CC       (PubMed:33909989). ATG4B constitutes the major protein for proteolytic
CC       activation (PubMed:30661429). ATG4D is the main enzyme for delipidation
CC       activity (By similarity). {ECO:0000250|UniProtKB:P60521,
CC       ECO:0000269|PubMed:15169837, ECO:0000269|PubMed:20818167,
CC       ECO:0000269|PubMed:29458288, ECO:0000269|PubMed:30661429,
CC       ECO:0000269|PubMed:31709703, ECO:0000269|PubMed:33909989}.
CC   -!- PTM: (Microbial infection) The Legionella effector RavZ is a
CC       deconjugating enzyme that hydrolyzes the amide bond between the C-
CC       terminal glycine residue and an adjacent aromatic residue in ATG8
CC       proteins conjugated to phosphatidylethanolamine (PE), producing an ATG8
CC       protein that is resistant to reconjugation by the host machinery due to
CC       the cleavage of the reactive C-terminal glycine (PubMed:31722778). RavZ
CC       is also able to mediate delipidation of ATG8 proteins conjugated to
CC       phosphatidylserine (PS) (PubMed:33909989).
CC       {ECO:0000269|PubMed:31722778, ECO:0000269|PubMed:33909989}.
CC   -!- PTM: Phosphorylation at Ser-87 and Ser-88 by TBK1 prevents interaction
CC       with ATG4 (ATG4A, ATG4B, ATG4C or ATG4D) (PubMed:31709703).
CC       Phosphorylation by TBK1 on autophagosomes prevents their delipidation
CC       by ATG4 and premature removal from nascent autophagosomes
CC       (PubMed:31709703). {ECO:0000269|PubMed:31709703}.
CC   -!- SIMILARITY: Belongs to the ATG8 family. {ECO:0000305}.
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DR   EMBL; AB030710; BAB21548.1; -; mRNA.
DR   EMBL; AF087848; AAK20400.1; -; mRNA.
DR   EMBL; AJ010569; CAA09249.1; -; mRNA.
DR   EMBL; AF077046; AAD27779.1; -; mRNA.
DR   EMBL; CR542217; CAG47013.1; -; mRNA.
DR   EMBL; AK289788; BAF82477.1; -; mRNA.
DR   EMBL; CH471114; EAW95630.1; -; Genomic_DNA.
DR   EMBL; BC005985; AAH05985.1; -; mRNA.
DR   EMBL; BC014594; AAH14594.1; -; mRNA.
DR   EMBL; BC029601; AAH29601.1; -; mRNA.
DR   CCDS; CCDS10921.1; -.
DR   RefSeq; NP_009216.1; NM_007285.6.
DR   PDB; 4CO7; X-ray; 2.00 A; A/B=1-117.
DR   PDB; 6H8C; NMR; -; A=1-116.
DR   PDB; 7LK3; X-ray; 1.90 A; A/B=1-117.
DR   PDBsum; 4CO7; -.
DR   PDBsum; 6H8C; -.
DR   PDBsum; 7LK3; -.
DR   AlphaFoldDB; P60520; -.
DR   SMR; P60520; -.
DR   BioGRID; 116473; 138.
DR   DIP; DIP-35051N; -.
DR   ELM; P60520; -.
DR   IntAct; P60520; 535.
DR   MINT; P60520; -.
DR   STRING; 9606.ENSP00000037243; -.
DR   MoonDB; P60520; Predicted.
DR   iPTMnet; P60520; -.
DR   PhosphoSitePlus; P60520; -.
DR   BioMuta; GABARAPL2; -.
DR   DMDM; 44888808; -.
DR   UCD-2DPAGE; P60520; -.
DR   EPD; P60520; -.
DR   jPOST; P60520; -.
DR   MassIVE; P60520; -.
DR   PaxDb; P60520; -.
DR   PeptideAtlas; P60520; -.
DR   PRIDE; P60520; -.
DR   ProteomicsDB; 57214; -.
DR   Antibodypedia; 30328; 587 antibodies from 35 providers.
DR   DNASU; 11345; -.
DR   Ensembl; ENST00000037243.7; ENSP00000037243.2; ENSG00000034713.8.
DR   GeneID; 11345; -.
DR   KEGG; hsa:11345; -.
DR   MANE-Select; ENST00000037243.7; ENSP00000037243.2; NM_007285.7; NP_009216.1.
DR   UCSC; uc002fen.3; human.
DR   CTD; 11345; -.
DR   DisGeNET; 11345; -.
DR   GeneCards; GABARAPL2; -.
DR   HGNC; HGNC:13291; GABARAPL2.
DR   HPA; ENSG00000034713; Low tissue specificity.
DR   MIM; 607452; gene.
DR   neXtProt; NX_P60520; -.
DR   OpenTargets; ENSG00000034713; -.
DR   PharmGKB; PA28482; -.
DR   VEuPathDB; HostDB:ENSG00000034713; -.
DR   eggNOG; KOG1654; Eukaryota.
DR   GeneTree; ENSGT00940000155010; -.
DR   HOGENOM; CLU_119276_0_1_1; -.
DR   InParanoid; P60520; -.
DR   OMA; AKMKWMF; -.
DR   OrthoDB; 1508198at2759; -.
DR   PhylomeDB; P60520; -.
DR   TreeFam; TF312964; -.
DR   PathwayCommons; P60520; -.
DR   Reactome; R-HSA-1632852; Macroautophagy.
DR   Reactome; R-HSA-8854214; TBC/RABGAPs.
DR   SABIO-RK; P60520; -.
DR   SignaLink; P60520; -.
DR   SIGNOR; P60520; -.
DR   BioGRID-ORCS; 11345; 14 hits in 1086 CRISPR screens.
DR   ChiTaRS; GABARAPL2; human.
DR   GeneWiki; GABARAPL2; -.
DR   GenomeRNAi; 11345; -.
DR   Pharos; P60520; Tbio.
DR   PRO; PR:P60520; -.
DR   Proteomes; UP000005640; Chromosome 16.
DR   RNAct; P60520; protein.
DR   Bgee; ENSG00000034713; Expressed in pons and 205 other tissues.
DR   ExpressionAtlas; P60520; baseline and differential.
DR   Genevisible; P60520; HS.
DR   GO; GO:0005776; C:autophagosome; IDA:UniProtKB.
DR   GO; GO:0000421; C:autophagosome membrane; IDA:UniProtKB.
DR   GO; GO:0005737; C:cytoplasm; IDA:BHF-UCL.
DR   GO; GO:0031410; C:cytoplasmic vesicle; IEA:UniProtKB-KW.
DR   GO; GO:0005829; C:cytosol; ISS:UniProtKB.
DR   GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0005794; C:Golgi apparatus; ISS:UniProtKB.
DR   GO; GO:0000139; C:Golgi membrane; IDA:BHF-UCL.
DR   GO; GO:0051117; F:ATPase binding; ISS:UniProtKB.
DR   GO; GO:0048487; F:beta-tubulin binding; ISS:UniProtKB.
DR   GO; GO:0050811; F:GABA receptor binding; ISS:UniProtKB.
DR   GO; GO:0008017; F:microtubule binding; NAS:UniProtKB.
DR   GO; GO:0000149; F:SNARE binding; ISS:UniProtKB.
DR   GO; GO:0031625; F:ubiquitin protein ligase binding; IPI:UniProtKB.
DR   GO; GO:0000045; P:autophagosome assembly; IBA:GO_Central.
DR   GO; GO:0006914; P:autophagy; NAS:UniProtKB.
DR   GO; GO:0000422; P:autophagy of mitochondrion; IBA:GO_Central.
DR   GO; GO:0006995; P:cellular response to nitrogen starvation; IBA:GO_Central.
DR   GO; GO:0006891; P:intra-Golgi vesicle-mediated transport; ISS:UniProtKB.
DR   GO; GO:0016236; P:macroautophagy; IBA:GO_Central.
DR   GO; GO:1901799; P:negative regulation of proteasomal protein catabolic process; IMP:BHF-UCL.
DR   GO; GO:0032781; P:positive regulation of ATP-dependent activity; ISS:UniProtKB.
DR   GO; GO:0070972; P:protein localization to endoplasmic reticulum; IDA:UniProtKB.
DR   GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR   InterPro; IPR004241; Atg8-like.
DR   InterPro; IPR029071; Ubiquitin-like_domsf.
DR   PANTHER; PTHR10969; PTHR10969; 1.
DR   Pfam; PF02991; ATG8; 1.
DR   SUPFAM; SSF54236; SSF54236; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Acetylation; Autophagy; Cytoplasmic vesicle;
KW   Endoplasmic reticulum; Golgi apparatus; Lipoprotein; Membrane;
KW   Phosphoprotein; Protein transport; Reference proteome; Transport.
FT   CHAIN           1..116
FT                   /note="Gamma-aminobutyric acid receptor-associated protein-
FT                   like 2"
FT                   /id="PRO_0000212373"
FT   PROPEP          117
FT                   /note="Removed in mature form"
FT                   /evidence="ECO:0000269|PubMed:15169837"
FT                   /id="PRO_0000423070"
FT   SITE            116..117
FT                   /note="Cleavage; by ATG4"
FT                   /evidence="ECO:0000269|PubMed:15169837"
FT   MOD_RES         24
FT                   /note="N6-acetyllysine"
FT                   /evidence="ECO:0007744|PubMed:19608861"
FT   MOD_RES         39
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:17525332"
FT   MOD_RES         87
FT                   /note="Phosphoserine; by TBK1"
FT                   /evidence="ECO:0000269|PubMed:31709703"
FT   MOD_RES         88
FT                   /note="Phosphoserine; by TBK1"
FT                   /evidence="ECO:0000269|PubMed:31709703"
FT   LIPID           116
FT                   /note="Phosphatidylethanolamine amidated glycine;
FT                   alternate"
FT                   /evidence="ECO:0000269|PubMed:12507496,
FT                   ECO:0000269|PubMed:33909989, ECO:0000305|PubMed:29458288"
FT   LIPID           116
FT                   /note="Phosphatidylserine amidated glycine; alternate"
FT                   /evidence="ECO:0000269|PubMed:33909989"
FT   VARIANT         51
FT                   /note="V -> A (in dbSNP:rs11556291)"
FT                   /id="VAR_049756"
FT   MUTAGEN         47
FT                   /note="R->A: Strongly reduced interaction with UBA5."
FT                   /evidence="ECO:0000269|PubMed:30990354"
FT   MUTAGEN         87..88
FT                   /note="SS->AA: Impaired phosphorylation by TBK1."
FT                   /evidence="ECO:0000269|PubMed:31709703"
FT   MUTAGEN         87..88
FT                   /note="SS->DD: Phospho-mimetic mutant; impaired interaction
FT                   with ATG4 proteins, preventing cleavage at the C-terminus,
FT                   conjugation to phosphatidylethanolamine."
FT                   /evidence="ECO:0000269|PubMed:31709703"
FT   MUTAGEN         88
FT                   /note="S->D: Phospho-mimetic mutant; abolished localization
FT                   to autophagosomes."
FT                   /evidence="ECO:0000269|PubMed:31709703"
FT   MUTAGEN         116
FT                   /note="G->A: Impairs localization at the autophagosomal
FT                   membrane."
FT                   /evidence="ECO:0000269|PubMed:15169837"
FT   CONFLICT        29
FT                   /note="V -> F (in Ref. 4; AAD27779)"
FT                   /evidence="ECO:0000305"
FT   HELIX           4..8
FT                   /evidence="ECO:0007829|PDB:7LK3"
FT   HELIX           11..24
FT                   /evidence="ECO:0007829|PDB:7LK3"
FT   STRAND          28..35
FT                   /evidence="ECO:0007829|PDB:7LK3"
FT   STRAND          39..41
FT                   /evidence="ECO:0007829|PDB:6H8C"
FT   STRAND          48..52
FT                   /evidence="ECO:0007829|PDB:7LK3"
FT   HELIX           57..67
FT                   /evidence="ECO:0007829|PDB:7LK3"
FT   STRAND          77..80
FT                   /evidence="ECO:0007829|PDB:7LK3"
FT   HELIX           91..98
FT                   /evidence="ECO:0007829|PDB:7LK3"
FT   STRAND          105..113
FT                   /evidence="ECO:0007829|PDB:7LK3"
SQ   SEQUENCE   117 AA;  13667 MW;  17ACB540FD5B975B CRC64;
     MKWMFKEDHS LEHRCVESAK IRAKYPDRVP VIVEKVSGSQ IVDIDKRKYL VPSDITVAQF
     MWIIRKRIQL PSEKAIFLFV DKTVPQSSLT MGQLYEKEKD EDGFLYVAYS GENTFGF
 
 
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