GCD1_ORYSI
ID GCD1_ORYSI Reviewed; 345 AA.
AC A2WW22;
DT 17-JUN-2020, integrated into UniProtKB/Swiss-Prot.
DT 20-MAR-2007, sequence version 1.
DT 25-MAY-2022, entry version 54.
DE RecName: Full=Protein GAMETE CELL DEFECTIVE 1, mitochondrial {ECO:0000305};
DE Short=OsGCD1 {ECO:0000305};
DE Flags: Precursor;
GN Name=GCD1 {ECO:0000305}; ORFNames=OsI_04101 {ECO:0000312|EMBL:EAY76168.1};
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
CC -!- FUNCTION: Essential for fertility (male and female gametophyte
CC functions and development) (By similarity). Required for the integrity
CC of female gametic mitochondria (By similarity). Involved in embryo
CC apical-basal patterning, and particularly dorsal-ventral patterning,
CC during early embryogenesis, and endosperm free nucleus positioning and
CC development as well as early endosperm development, probably by
CC modulating the expression pattern of related genes (e.g. AL1, MYB3/AL2,
CC CYP78A13/GE, PNH1, HAZ1, MPK6 and OSH1) (By similarity). Has function
CC in triggering of endosperm programmed cell death (PCD) leading to
CC syncytial endosperm cellularization and starchy endosperm cell
CC maturation (By similarity). Implicated in central vacuole dynamics
CC necessary for microspore development leading to pollen production, and
CC for pollen development and germination (By similarity).
CC {ECO:0000250|UniProtKB:Q8S2G4, ECO:0000250|UniProtKB:Q9LVA9}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000250|UniProtKB:Q8S2G4}.
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DR EMBL; CM000126; EAY76168.1; -; Genomic_DNA.
DR AlphaFoldDB; A2WW22; -.
DR SMR; A2WW22; -.
DR STRING; 39946.A2WW22; -.
DR EnsemblPlants; BGIOSGA000641-TA; BGIOSGA000641-PA; BGIOSGA000641.
DR Gramene; BGIOSGA000641-TA; BGIOSGA000641-PA; BGIOSGA000641.
DR HOGENOM; CLU_058322_0_0_1; -.
DR OMA; SEGWNFT; -.
DR Proteomes; UP000007015; Chromosome 1.
DR GO; GO:0005739; C:mitochondrion; ISS:UniProtKB.
DR GO; GO:0007154; P:cell communication; IEA:EnsemblPlants.
DR GO; GO:0009793; P:embryo development ending in seed dormancy; ISS:UniProtKB.
DR GO; GO:0010342; P:endosperm cellularization; IEA:EnsemblPlants.
DR GO; GO:0009960; P:endosperm development; ISS:UniProtKB.
DR GO; GO:0048229; P:gametophyte development; ISS:UniProtKB.
DR GO; GO:0007006; P:mitochondrial membrane organization; IEA:EnsemblPlants.
DR GO; GO:0051647; P:nucleus localization; ISS:UniProtKB.
DR GO; GO:0009555; P:pollen development; ISS:UniProtKB.
DR GO; GO:0009846; P:pollen germination; ISS:UniProtKB.
DR GO; GO:0048868; P:pollen tube development; IEA:EnsemblPlants.
DR GO; GO:0010468; P:regulation of gene expression; ISS:UniProtKB.
DR GO; GO:0043067; P:regulation of programmed cell death; ISS:UniProtKB.
DR GO; GO:0010581; P:regulation of starch biosynthetic process; ISS:UniProtKB.
DR GO; GO:0007033; P:vacuole organization; ISS:UniProtKB.
PE 3: Inferred from homology;
KW Developmental protein; Mitochondrion; Reference proteome; Transit peptide.
FT TRANSIT 1..43
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 44..345
FT /note="Protein GAMETE CELL DEFECTIVE 1, mitochondrial"
FT /evidence="ECO:0000255"
FT /id="PRO_0000450246"
FT REGION 36..82
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 44..59
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 345 AA; 39603 MW; 8B629D12DBB40081 CRC64;
MLALRKTLLH GRLPAAPPAA AAAAIASRIP ALLRRLSSSP GDGQGGDEWG SSWSTGITKE
HFDGSDAAVG RPVTSPSKPV SPELAAVRAM DEEDEIFRAM ERDNREAKAY VDSWGDRMRE
TCELLKQVRE PGSRGSYLKD SEKQEMYRLH KEDPETYTVE RLAKDFRVMR QRVHAILWLK
EMEEEEERKL GKPLDDSVEV LLDSCPEFFN SHDREFHVAS LPYKPDFKVM PEGWDGTTRD
PDEVLYEISM KEDQMLYEEF VQRLQFNKKK VAGEVKCHKY SRRRPDDGWT YMVEKLGVQS
KRGSGGGWKF ASLPDGSSRP LNDMEKMYVK RETPKRRRRI MAPFK
