GCS1_OCIBA
ID GCS1_OCIBA Reviewed; 540 AA.
AC Q5SBP5;
DT 05-OCT-2010, integrated into UniProtKB/Swiss-Prot.
DT 21-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 59.
DE RecName: Full=Gamma-cadinene synthase;
DE EC=4.2.3.92;
DE AltName: Full=(+)-gamma-cadinene synthase;
GN Name=CDS;
OS Ocimum basilicum (Sweet basil).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ociminae;
OC Ocimum.
OX NCBI_TaxID=39350;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AND CATALYTIC ACTIVITY.
RX PubMed=15516500; DOI=10.1104/pp.104.051318;
RA Iijima Y., Davidovich-Rikanati R., Fridman E., Gang D.R., Bar E.,
RA Lewinsohn E., Pichersky E.;
RT "The biochemical and molecular basis for the divergent patterns in the
RT biosynthesis of terpenes and phenylpropenes in the peltate glands of three
RT cultivars of basil.";
RL Plant Physiol. 136:3724-3736(2004).
CC -!- FUNCTION: Sesquiterpene synthase that catalyzes the cyclization of
CC trans,trans-farnesyl diphosphate (FPP) to gamma cadinene.
CC {ECO:0000269|PubMed:15516500}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2E,6E)-farnesyl diphosphate = (+)-gamma-cadinene +
CC diphosphate; Xref=Rhea:RHEA:31827, ChEBI:CHEBI:33019,
CC ChEBI:CHEBI:63205, ChEBI:CHEBI:175763; EC=4.2.3.92;
CC Evidence={ECO:0000269|PubMed:15516500};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC Name=Mn(2+); Xref=ChEBI:CHEBI:29035; Evidence={ECO:0000250};
CC Note=Binds 3 Mg(2+) or Mn(2+) ions per subunit. {ECO:0000250};
CC -!- PATHWAY: Secondary metabolite biosynthesis; terpenoid biosynthesis.
CC -!- DOMAIN: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for
CC the catalytic activity, presumably through binding to Mg(2+).
CC -!- SIMILARITY: Belongs to the terpene synthase family. {ECO:0000305}.
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DR EMBL; AY693645; AAV63787.1; -; mRNA.
DR AlphaFoldDB; Q5SBP5; -.
DR SMR; Q5SBP5; -.
DR KEGG; ag:AAV63787; -.
DR UniPathway; UPA00213; -.
DR GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR GO; GO:0010333; F:terpene synthase activity; IEA:InterPro.
DR GO; GO:0016102; P:diterpenoid biosynthetic process; IEA:InterPro.
DR CDD; cd00684; Terpene_cyclase_plant_C1; 1.
DR Gene3D; 1.10.600.10; -; 1.
DR Gene3D; 1.50.10.130; -; 1.
DR InterPro; IPR008949; Isoprenoid_synthase_dom_sf.
DR InterPro; IPR034741; Terpene_cyclase-like_1_C.
DR InterPro; IPR044814; Terpene_cyclase_plant_C1.
DR InterPro; IPR001906; Terpene_synth_N.
DR InterPro; IPR036965; Terpene_synth_N_sf.
DR InterPro; IPR005630; Terpene_synthase_metal-bd.
DR InterPro; IPR008930; Terpenoid_cyclase/PrenylTrfase.
DR Pfam; PF01397; Terpene_synth; 1.
DR Pfam; PF03936; Terpene_synth_C; 1.
DR SFLD; SFLDG01019; Terpene_Cyclase_Like_1_C_Termi; 1.
DR SUPFAM; SSF48239; SSF48239; 1.
DR SUPFAM; SSF48576; SSF48576; 1.
PE 1: Evidence at protein level;
KW Lyase; Magnesium; Metal-binding.
FT CHAIN 1..540
FT /note="Gamma-cadinene synthase"
FT /id="PRO_0000399250"
FT MOTIF 292..296
FT /note="DDXXD motif"
FT BINDING 292
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 292
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 296
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 296
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 436
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250"
FT BINDING 440
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250"
FT BINDING 444
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250"
SQ SEQUENCE 540 AA; 63566 MW; F1B44726BF7A2B97 CRC64;
MDVSILRDVR PPVTSYAPNI WADTFSNISL DEEVQKKYAE TIEALKQVVR GMLMAAATPI
KQMIFIDTLE RLGLAYHFET EIEHKLQKIY DDNVCGDDCD LFTTALRFRL LRQHRHHVSC
DVFDKFLYEE GKFKGDAEGL LSLYEASHVR FHNEKILEEA ERFTRQELSC WIKLQSPLKD
KVKRALERPL HREVPILYAR HFISIYEKDE SMDEHLLKLA KFNFNFLQNL YKKELYDLSR
WWNKFDLKTK LPYIRDRLAE AYLWGVGYHF EPQYSYVRKG VVLSIKIIGI LDDTYDNYAT
VNEAQLFTEI LDRWSMDEID RLPDYMKIVL HFVMSAYEEY ERDAKIVYGK KFASPYFKET
IQQLARGYNQ ELKWVMEKQM PPFKDYLKNS EITSCIYIMF ASIIPGLKSF TQEAIDWIKN
EPNFAVKAGL IGRYWDDIGS HKRESKGGEM LTVMDCYMKQ YSVSIQETIS EFAKAVEDSW
KEVNEGWVYT ISMSKEITVQ FLNYSRMCDA SYNRNNGDGY TDPSFAKSNI TALFVDPIII