GCS2_ARATH
ID GCS2_ARATH Reviewed; 789 AA.
AC Q84M89; O48699;
DT 06-FEB-2013, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 117.
DE RecName: Full=Alpha-glucosidase 2;
DE Short=Glucosidase 2;
DE EC=3.2.1.-;
GN Name=GCS2; OrderedLocusNames=At1g24320; ORFNames=F3I6.26;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- PATHWAY: Glycan metabolism; N-glycan degradation.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 63 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAC00593.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC002396; AAC00593.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE30516.1; -; Genomic_DNA.
DR EMBL; BT006494; AAP21302.1; -; mRNA.
DR EMBL; AK227426; BAE99430.1; -; mRNA.
DR PIR; T00663; T00663.
DR RefSeq; NP_173842.2; NM_102278.6.
DR AlphaFoldDB; Q84M89; -.
DR SMR; Q84M89; -.
DR STRING; 3702.AT1G24320.1; -.
DR CAZy; GH63; Glycoside Hydrolase Family 63.
DR PaxDb; Q84M89; -.
DR PRIDE; Q84M89; -.
DR ProteomicsDB; 222024; -.
DR EnsemblPlants; AT1G24320.1; AT1G24320.1; AT1G24320.
DR GeneID; 839048; -.
DR Gramene; AT1G24320.1; AT1G24320.1; AT1G24320.
DR KEGG; ath:AT1G24320; -.
DR Araport; AT1G24320; -.
DR TAIR; locus:2032462; AT1G24320.
DR eggNOG; KOG2161; Eukaryota.
DR HOGENOM; CLU_007380_1_0_1; -.
DR InParanoid; Q84M89; -.
DR OMA; IAPDEFH; -.
DR OrthoDB; 278028at2759; -.
DR PhylomeDB; Q84M89; -.
DR BioCyc; ARA:AT1G24320-MON; -.
DR UniPathway; UPA00280; -.
DR PRO; PR:Q84M89; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q84M89; baseline and differential.
DR Genevisible; Q84M89; AT.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IBA:GO_Central.
DR GO; GO:0004573; F:Glc3Man9GlcNAc2 oligosaccharide glucosidase activity; IBA:GO_Central.
DR GO; GO:0009311; P:oligosaccharide metabolic process; IEA:InterPro.
DR GO; GO:0006487; P:protein N-linked glycosylation; IBA:GO_Central.
DR Gene3D; 1.50.10.10; -; 1.
DR Gene3D; 2.70.98.110; -; 1.
DR InterPro; IPR008928; 6-hairpin_glycosidase_sf.
DR InterPro; IPR012341; 6hp_glycosidase-like_sf.
DR InterPro; IPR031335; Glyco_hydro_63_C.
DR InterPro; IPR031631; Glyco_hydro_63N.
DR InterPro; IPR038518; Glyco_hydro_63N_sf.
DR InterPro; IPR004888; Glycoside_hydrolase_63.
DR PANTHER; PTHR10412; PTHR10412; 1.
DR Pfam; PF03200; Glyco_hydro_63; 1.
DR Pfam; PF16923; Glyco_hydro_63N; 1.
DR SUPFAM; SSF48208; SSF48208; 1.
PE 2: Evidence at transcript level;
KW Glycosidase; Hydrolase; Reference proteome.
FT CHAIN 1..789
FT /note="Alpha-glucosidase 2"
FT /id="PRO_0000420921"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 512..531
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 789 AA; 90609 MW; F01D5E750921D159 CRC64;
MTGLSPSGDI KPLLDDESQR PRVITPFPSP KLTDLSMFQG EHKESLYWGT YRPQMYFGVR
ARTPKSLVAG LMWLVMKDGK PVMRHFCENS NDLKSFGWKE HNGRDFGRQE LFEQNMVLET
SFVKSEEGSL GYGGDWSIRI NVQNMLNDDE VKRSTHLFFY LADEGCNGVN LGKDVLRLKE
SSVLASGSRQ DVGNWQMHLK SQNHLETHYC GFKTPDIVNL SGLVQQNLTA QEEKSGLLQL
SDSSEDSSNI YVFQISTTNQ STIDIAFVSG IKEETSNMEN RIMSLTGLPL SSLLEEKHIA
FNAKFNECFN LSDKLDPETL VVGKAAIGNM LGGIGYFYGQ SKIHFPKSPL AKSEDDFLLY
WPAELYTAVP SRPRFPRGFL WDEGFHQLLI WRWDVHITLE IVGNWLDLMN IDGWIPREQV
LGAEALSKIP KQYVVQFPSN GNPPTLLLVI RDLINGIRTE KFNEADRDKI LSFLDRAFVR
LDAWFKWFNT SQIGKEKGSY YWHGRDNITN RELNPQSLSS GLDDYPRASH PNEDERHVDL
RCWMYLAADS MNSIQEFMGK NDILVTEDYS SIAKLLSDFT LLNQMHYDKD HGAYLDFGNH
TEEVRLVWKE VIHEDGHLSR ELVRETYGKP ELRLVPHIGY VSFFPFMFRI IPADSSILDK
QLDLISNGNI VWSDYGLLSL AKTSSLYMKY NSEHQAPYWR GAIWMNMNYM ILSSLHHYST
VDGPYNSKAR TIYEELRSNL IRNVVRNYDQ TGIIWEHYDQ TKGTGEGARV FTGWSALILL
IMSEEYPLF