GCSPB_FLAPR
ID GCSPB_FLAPR Reviewed; 1034 AA.
AC P49362;
DT 01-FEB-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1996, sequence version 1.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=Glycine dehydrogenase (decarboxylating) B, mitochondrial;
DE EC=1.4.4.2;
DE AltName: Full=Glycine cleavage system P protein B;
DE AltName: Full=Glycine decarboxylase B;
DE AltName: Full=Glycine dehydrogenase (aminomethyl-transferring) B;
DE Flags: Precursor;
GN Name=GDCSPB;
OS Flaveria pringlei.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Asteroideae;
OC Heliantheae alliance; Tageteae; Flaveria.
OX NCBI_TaxID=4226;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC TISSUE=Leaf;
RX PubMed=8529630; DOI=10.1111/j.1432-1033.1995.116_c.x;
RA Bauwe H., Chu C.-C., Kopriva S., Nan Q.;
RT "Structure and expression analysis of the gdcsPA and gdcsPB genes encoding
RT two P-isoproteins of the glycine-cleavage system from Flaveria pringlei.";
RL Eur. J. Biochem. 234:116-124(1995).
CC -!- FUNCTION: The glycine cleavage system catalyzes the degradation of
CC glycine. The P protein binds the alpha-amino group of glycine through
CC its pyridoxal phosphate cofactor; CO(2) is released and the remaining
CC methylamine moiety is then transferred to the lipoamide cofactor of the
CC H protein.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(R)-N(6)-lipoyl-L-lysyl-[glycine-cleavage complex H protein] +
CC glycine + H(+) = (R)-N(6)-(S(8)-aminomethyldihydrolipoyl)-L-lysyl-
CC [glycine-cleavage complex H protein] + CO2; Xref=Rhea:RHEA:24304,
CC Rhea:RHEA-COMP:10494, Rhea:RHEA-COMP:10495, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:16526, ChEBI:CHEBI:57305, ChEBI:CHEBI:83099,
CC ChEBI:CHEBI:83143; EC=1.4.4.2;
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC -!- SUBUNIT: Homodimer (By similarity). The glycine cleavage system is
CC composed of four proteins: P, T, L and H. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion.
CC -!- SIMILARITY: Belongs to the GcvP family. {ECO:0000305}.
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DR EMBL; Z54239; CAA91000.1; -; Genomic_DNA.
DR PIR; S63536; S63536.
DR AlphaFoldDB; P49362; -.
DR SMR; P49362; -.
DR PRIDE; P49362; -.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR GO; GO:0004375; F:glycine dehydrogenase (decarboxylating) activity; IEA:UniProtKB-EC.
DR GO; GO:0006546; P:glycine catabolic process; IEA:InterPro.
DR GO; GO:1901566; P:organonitrogen compound biosynthetic process; IEA:UniProt.
DR CDD; cd00613; GDC-P; 2.
DR Gene3D; 3.40.640.10; -; 2.
DR Gene3D; 3.90.1150.10; -; 2.
DR HAMAP; MF_00711; GcvP; 1.
DR InterPro; IPR003437; GcvP.
DR InterPro; IPR020581; GDC_P.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR015422; PyrdxlP-dep_Trfase_small.
DR PANTHER; PTHR11773; PTHR11773; 1.
DR Pfam; PF02347; GDC-P; 2.
DR SUPFAM; SSF53383; SSF53383; 2.
DR TIGRFAMs; TIGR00461; gcvP; 1.
PE 3: Inferred from homology;
KW Mitochondrion; Oxidoreductase; Pyridoxal phosphate; Transit peptide.
FT TRANSIT 1..63
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 64..1034
FT /note="Glycine dehydrogenase (decarboxylating) B,
FT mitochondrial"
FT /id="PRO_0000010747"
FT MOD_RES 770
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000250"
SQ SEQUENCE 1034 AA; 112780 MW; 713D6490B48C2932 CRC64;
MERARRLAIL GRLVSQTKHN PSISSPALCS PSRYVSSLSP YVCSGTNVRS DRNLNGFGSQ
VRTISVEALK PSDTFPRRHN SATPEEQTKM AEFVGFPNLD SLIDATVPKS IRLDSMKYSK
FDEGLTESQM IAHMQDLASK NKIFKSFIGM GYYNTSVPTV ILRNIMENPG WYTQYTPYQA
EIAQGRLESL LNFQTMITDL TGLPMSNASL LDEGTAAAEA MAMCNNIQKG KKKTFIIASN
CHPQTIDICK TRADGFDLKV VTSDLKDFDY SSGDVCGVLV QYPGTEGELL DYSEFIKNAH
ANGVKVVMAS DLLALTILKP PGELGADIVV GSAQRFGVPM GYGGPHAAFL ATSQEYKRMM
PGRIIGVSVD SSGKPALRMA MQTREQHIRR DKATSNICTA QALLANMAAM FGVYHGPEGL
KTIAKRVHGL AGTFASGLKK LGTVQVQDLP FFDTVKVTCA DSKAIAEEAY KHKMNLRIVD
KNTITVAFDE TTTIEDVDTL FKVFALGKPV TFTAASIAPE VQDAIPSGLV RETPYLTHPI
FNMYHTEHEL LRYISKLQSK DLSLCHSMIP LGSCTMKLNA TTEMMPVTWP AFADIHPFAP
TEQAQGYQEM FKNLGDLLCT ITGFDSFSLQ PNAGAAGEYA GLMVIRAYHM ARGDHHRNVC
IIPVSAHGTN PASAAMCGMK IITVGTDSKG NINIEELRKA AEANKENLSA LMVTYPSTHG
VYEEGIDEIC KIIHDNGGQV YMDGANMNAQ VGLTSPGWIG ADVCHLNLHK TFCIPHGGGG
PGMGPIGVKK HLAPYLPSHP VVPTGGIPAP EQSQPLGTIA AAPWGSALIL PISYTYIAMM
GSQGITNASK IAILNANYMA KRLENHYPIL FRGVNGTVAH EFIVDLRPLK TTAGIEPEDV
AKRLIDYGFH GPTMSWPVPG TLMIEPTESE SKAELDRFCD ALISIRQEIA EIEKGNVDFN
NNVIKGAPHP PQLLMADKWT KPYSREYAAY PAPWLRAAKF WPTTCRVDNV YGDRNLICTL
QPPQEYEEKA EATA