GDE_RABIT
ID GDE_RABIT Reviewed; 1555 AA.
AC P35574;
DT 01-JUN-1994, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1994, sequence version 1.
DT 25-MAY-2022, entry version 116.
DE RecName: Full=Glycogen debranching enzyme;
DE AltName: Full=Glycogen debrancher;
DE Includes:
DE RecName: Full=4-alpha-glucanotransferase;
DE EC=2.4.1.25;
DE AltName: Full=Oligo-1,4-1,4-glucantransferase;
DE Includes:
DE RecName: Full=Amylo-alpha-1,6-glucosidase;
DE Short=Amylo-1,6-glucosidase;
DE EC=3.2.1.33;
DE AltName: Full=Dextrin 6-alpha-D-glucosidase;
GN Name=AGL;
OS Oryctolagus cuniculus (Rabbit).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus.
OX NCBI_TaxID=9986;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND PARTIAL PROTEIN SEQUENCE.
RC TISSUE=Muscle;
RX PubMed=8215409; DOI=10.1006/abbi.1993.1505;
RA Liu W., de Castro M.L., Takrama J., Bilous P.T., Vinayagamoorthy T.,
RA Madsen N.B., Bleackley R.C.;
RT "Molecular cloning, sequencing, and analysis of the cDNA for rabbit muscle
RT glycogen debranching enzyme.";
RL Arch. Biochem. Biophys. 306:232-239(1993).
CC -!- FUNCTION: Multifunctional enzyme acting as 1,4-alpha-D-glucan:1,4-
CC alpha-D-glucan 4-alpha-D-glycosyltransferase and amylo-1,6-glucosidase
CC in glycogen degradation.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Transfers a segment of a (1->4)-alpha-D-glucan to a new
CC position in an acceptor, which may be glucose or a (1->4)-alpha-D-
CC glucan.; EC=2.4.1.25;
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Hydrolysis of (1->6)-alpha-D-glucosidic branch linkages in
CC glycogen phosphorylase limit dextrin.; EC=3.2.1.33;
CC -!- SUBUNIT: Monomer. Interacts with NHLRC1/malin (By similarity).
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}. Note=Under
CC glycogenolytic conditions localizes to the nucleus. {ECO:0000250}.
CC -!- PTM: The N-terminus is blocked.
CC -!- PTM: Ubiquitinated. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the glycogen debranching enzyme family.
CC {ECO:0000305}.
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DR EMBL; L10605; AAA16364.1; -; mRNA.
DR PIR; S38758; S38758.
DR RefSeq; NP_001075716.1; NM_001082247.1.
DR AlphaFoldDB; P35574; -.
DR SMR; P35574; -.
DR STRING; 9986.ENSOCUP00000019854; -.
DR BindingDB; P35574; -.
DR ChEMBL; CHEMBL5273; -.
DR DrugCentral; P35574; -.
DR CAZy; GH13; Glycoside Hydrolase Family 13.
DR CAZy; GH133; Glycoside Hydrolase Family 133.
DR PRIDE; P35574; -.
DR GeneID; 100009066; -.
DR KEGG; ocu:100009066; -.
DR CTD; 178; -.
DR eggNOG; KOG3625; Eukaryota.
DR InParanoid; P35574; -.
DR OrthoDB; 33175at2759; -.
DR PRO; PR:P35574; -.
DR Proteomes; UP000001811; Unplaced.
DR GO; GO:0005737; C:cytoplasm; ISS:UniProtKB.
DR GO; GO:0004134; F:4-alpha-glucanotransferase activity; IEA:UniProtKB-EC.
DR GO; GO:0004135; F:amylo-alpha-1,6-glucosidase activity; IEA:UniProtKB-EC.
DR GO; GO:0102500; F:beta-maltose 4-alpha-glucanotransferase activity; IEA:UniProtKB-EC.
DR GO; GO:0005978; P:glycogen biosynthetic process; IEA:UniProtKB-KW.
DR GO; GO:0005980; P:glycogen catabolic process; IEA:InterPro.
DR CDD; cd11327; AmyAc_Glg_debranch_2; 1.
DR InterPro; IPR008928; 6-hairpin_glycosidase_sf.
DR InterPro; IPR010401; AGL/Gdb1.
DR InterPro; IPR032788; AGL_central.
DR InterPro; IPR029436; AGL_euk_N.
DR InterPro; IPR032792; AGL_glucanoTrfase.
DR InterPro; IPR032790; GDE_C.
DR InterPro; IPR006421; Glycogen_debranch_met.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR PANTHER; PTHR10569; PTHR10569; 1.
DR Pfam; PF06202; GDE_C; 1.
DR Pfam; PF14701; hDGE_amylase; 1.
DR Pfam; PF14702; hGDE_central; 1.
DR Pfam; PF14699; hGDE_N; 1.
DR SUPFAM; SSF48208; SSF48208; 1.
DR SUPFAM; SSF51445; SSF51445; 1.
DR TIGRFAMs; TIGR01531; glyc_debranch; 1.
PE 1: Evidence at protein level;
KW Cytoplasm; Direct protein sequencing; Glycogen biosynthesis; Glycosidase;
KW Glycosyltransferase; Hydrolase; Multifunctional enzyme; Phosphoprotein;
KW Reference proteome; Transferase; Ubl conjugation.
FT CHAIN 1..1555
FT /note="Glycogen debranching enzyme"
FT /id="PRO_0000087451"
FT REGION 1..?
FT /note="4-alpha-glucanotransferase"
FT REGION ?..1555
FT /note="Amylo-1,6-glucosidase"
FT ACT_SITE 549
FT /evidence="ECO:0000250"
FT ACT_SITE 552
FT /evidence="ECO:0000250"
FT ACT_SITE 650
FT /evidence="ECO:0000250"
FT MOD_RES 87
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:P35573"
SQ SEQUENCE 1555 AA; 177656 MW; 7AD214297CB966E0 CRC64;
MGNSFDFGVL LILLKYFKSS RSQNGHSKQI RILLLNEMEK LEKTLFRLEQ GFELQFRLGP
TLQGKPVTVF TNYPFPGETF NREKFRSLEW ENPTEREDDS DKYCKLNLQQ SGSFQYYFLQ
GNEKSGGGYI VVDPILRVGA DNHMLHLDCV TLQTFLAKCL GPFDEWESRL RVAKESGYNM
IHFTPLQTLG LSRSCYSLAD QLELNPDFSR PHKKYTWSDV GQLVEKLKRE WNVLCITDVV
YNHTAANSKW IQEHPECAYN LVNSPHLKPA WVLDRALWHF SCDVAEGKYK NRGVPALIEN
DHHLNCIRKV IWEDIFPKLH LWEFFQVDVY KAVEKFRGLL TQETWRVIKS DPKQHLKIIQ
DPEYRRFGCT VDMNIALATF IPHDNGPAAI EECCNWFRKR IEELNSEKHQ LMNYHQEQAV
NCLLGNVFYE RLAGHGPKLG PVTRKYPLVT RYFTFPFEEM PVSTEETMIH LPNKACFFMA
HNGWVMGDDP LRNFAEPGSD VYLRRELICW GDSVKLRYGT KPEDCPYLWA HMRKYTEIIA
TYFQGVRLDN CHSTPLHVAE YMLDAARKLQ PNLYVVAELF TGSEDLDNIF VTRLGISSLI
REAMSAYNSH EEGRLVYRYG GEPVGSFVQP CLRPLMPAIA HALFMDITHD NECPIVHRSV
YDALPSTTIV SMACCASGST RGYDELVPHQ ISVVSEERFY TKWNPEALPS NAGEVNFQSG
IIAARCAINK LHQELGAKGF IQVYVDQVDE DIVAVTRHSP SIHQSFVAVS RTAFRNPKTS
FYSKDVPQMC IPGKIEEVVL EARTIERNIS PYRKDENSIN GMPNITVEIR EHIQLNESRI
VKQAGVTTKG PNEYIQEIEF ENLSPGSVII FRVSLDPHAQ VAVGILRNHL TQFSAHFKAG
SLAVDNSDPI LKIPFASIAS KLTLAEINQI LYRCESEEQE DGGGCYDIPN WSSLKYAGLQ
GLMSVLAEIR PKNDLGHPFC DNLRSGDWMI DYVSGRLISR SGTIAEVGKW LQAMFFYLKQ
IPRYLIPCYF DAILIGAYTT LLDIAWKQMS SFVQTGSTFV KHLSLGSVQM CGVGKFPSLP
LLSPSLTDVP YRLNEITKEK EQCCVSLAAG LPHFSSGIFR CWGRDTFIAL RGLLLITGRY
LEARNIILAF AGTLRHGLIP NLLGEGTYAR YNCRDAVWWW LQCIQDYCKM VPNGLDILKC
PVSRMYPTDD SAPLPAGTLD QPLFDVIQEA MQRHMQGIQF RERNAGPQID RNMKDEGFTV
IAGVNEETGF VYGGNRFNCG TWMDKMGESD RARNRGIPAT PRDGSAVEIV GLCKSTVRWL
LELSKKNIFP YHEVRVKRHG KVVTVSYEEW NRKIQDNFEK RFHVSEDPSA SNEEHPNLVH
KRGIYKDSYG ASSPWCDYQL RPNFTIAMVV APELFTAEKA WKALEIAEKK LLGPLGMKTL
DPDDMVYCGI YDNALDNDNY NLAKGFNYHQ GPEWLWPVGY FLRAKLYFSK LMDRETNART
IFLVKNVLSR HYVHLERSPW KGLPELTNEN GQYCPFSCET QAWSIATILE TLYDL