GDL39_ARATH
ID GDL39_ARATH Reviewed; 363 AA.
AC Q9SJA9;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 24-MAR-2009, sequence version 2.
DT 03-AUG-2022, entry version 108.
DE RecName: Full=GDSL esterase/lipase At2g24560;
DE EC=3.1.1.-;
DE AltName: Full=Extracellular lipase At2g24560;
DE Flags: Precursor;
GN OrderedLocusNames=At2g24560; ORFNames=F25P17.14;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 23-349.
RG Center for eukaryotic structural genomics (CESG);
RL Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP REVIEW.
RX PubMed=15522763; DOI=10.1016/j.plipres.2004.09.002;
RA Akoh C.C., Lee G.-C., Liaw Y.-C., Huang T.-H., Shaw J.-F.;
RT "GDSL family of serine esterases/lipases.";
RL Prog. Lipid Res. 43:534-552(2004).
RN [5]
RP GENE FAMILY.
RX PubMed=18819574; DOI=10.3923/pjbs.2008.763.767;
RA Ling H.;
RT "Sequence analysis of GDSL lipase gene family in Arabidopsis thaliana.";
RL Pak. J. Biol. Sci. 11:763-767(2008).
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the 'GDSL' lipolytic enzyme family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD23897.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC006954; AAD23897.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002685; AEC07592.1; -; Genomic_DNA.
DR EMBL; BT015551; -; NOT_ANNOTATED_CDS; mRNA.
DR PIR; B84638; B84638.
DR RefSeq; NP_180032.2; NM_128017.3.
DR AlphaFoldDB; Q9SJA9; -.
DR SMR; Q9SJA9; -.
DR STRING; 3702.AT2G24560.1; -.
DR PaxDb; Q9SJA9; -.
DR PRIDE; Q9SJA9; -.
DR ProteomicsDB; 224756; -.
DR EnsemblPlants; AT2G24560.1; AT2G24560.1; AT2G24560.
DR GeneID; 816992; -.
DR Gramene; AT2G24560.1; AT2G24560.1; AT2G24560.
DR KEGG; ath:AT2G24560; -.
DR Araport; AT2G24560; -.
DR TAIR; locus:2046663; AT2G24560.
DR eggNOG; ENOG502QSNM; Eukaryota.
DR HOGENOM; CLU_015101_0_1_1; -.
DR InParanoid; Q9SJA9; -.
DR OMA; CRNHSEF; -.
DR OrthoDB; 704138at2759; -.
DR PhylomeDB; Q9SJA9; -.
DR BioCyc; ARA:AT2G24560-MON; -.
DR PRO; PR:Q9SJA9; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9SJA9; baseline and differential.
DR Genevisible; Q9SJA9; AT.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.
DR GO; GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.
DR CDD; cd01837; SGNH_plant_lipase_like; 1.
DR Gene3D; 3.40.50.1110; -; 1.
DR InterPro; IPR001087; GDSL.
DR InterPro; IPR036514; SGNH_hydro_sf.
DR InterPro; IPR035669; SGNH_plant_lipase-like.
DR Pfam; PF00657; Lipase_GDSL; 1.
PE 2: Evidence at transcript level;
KW Glycoprotein; Hydrolase; Lipid degradation; Lipid metabolism;
KW Reference proteome; Secreted; Signal.
FT SIGNAL 1..22
FT /evidence="ECO:0000255"
FT CHAIN 23..363
FT /note="GDSL esterase/lipase At2g24560"
FT /id="PRO_0000367380"
FT ACT_SITE 41
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
FT ACT_SITE 333
FT /evidence="ECO:0000250"
FT ACT_SITE 336
FT /evidence="ECO:0000250"
FT CARBOHYD 25
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 103
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 325
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 363 AA; 40815 MW; 3195FC3826D2E1C9 CRC64;
MSTSKTITFT LFIAALLSSC DAATNATSQP LFPAILIFGD STVDTGNNNY HSQTIFKAKH
LPYGIDLPNH KASGRFTNGK IFSDIIATKL NIKQFVPPFL QPNLSDQEIV TGVCFASAGA
GYDDHTSLST QAIRVLDQQK MFKNYIARLK SIVGDKKAME IIKNALVVIS AGPNDFILNY
YDIPSRRLEF PHISGYQDFV LQRLDNFVRE LYSLGCRKIM VGGLPPMGCL PIQMTAKFRN
ALRFCLEQEN RDSVLYNQKL QNLLPQIEAS LTGSKILYSN VYDPMMDMMQ NPSKYGFKET
KRGCCGTGHL ETSFMCNAFS PTCRNHSEFL FFDSIHPSEA TYNYMGNFLD TQIRVWLSLR
LKS
