GDL81_ARATH
ID GDL81_ARATH Reviewed; 369 AA.
AC Q9FJ25; F4JZZ2;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=GDSL esterase/lipase At5g41890;
DE EC=3.1.1.-;
GN OrderedLocusNames=At5g41890; ORFNames=K16L22.18;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9872454; DOI=10.1093/dnares/5.5.297;
RA Nakamura Y., Sato S., Asamizu E., Kaneko T., Kotani H., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VII. Sequence
RT features of the regions of 1,013,767 bp covered by sixteen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:297-308(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP REVIEW.
RX PubMed=15522763; DOI=10.1016/j.plipres.2004.09.002;
RA Akoh C.C., Lee G.-C., Liaw Y.-C., Huang T.-H., Shaw J.-F.;
RT "GDSL family of serine esterases/lipases.";
RL Prog. Lipid Res. 43:534-552(2004).
RN [4]
RP GENE FAMILY.
RX PubMed=18819574; DOI=10.3923/pjbs.2008.763.767;
RA Ling H.;
RT "Sequence analysis of GDSL lipase gene family in Arabidopsis thaliana.";
RL Pak. J. Biol. Sci. 11:763-767(2008).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q9FJ25-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q9FJ25-2; Sequence=VSP_042247;
CC -!- SIMILARITY: Belongs to the 'GDSL' lipolytic enzyme family.
CC {ECO:0000305}.
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DR EMBL; AB016871; BAB10664.1; -; Genomic_DNA.
DR EMBL; CP002688; AED94740.1; -; Genomic_DNA.
DR RefSeq; NP_199004.2; NM_123554.3. [Q9FJ25-2]
DR AlphaFoldDB; Q9FJ25; -.
DR SMR; Q9FJ25; -.
DR STRING; 3702.AT5G41890.1; -.
DR PaxDb; Q9FJ25; -.
DR PRIDE; Q9FJ25; -.
DR ProteomicsDB; 221991; -. [Q9FJ25-1]
DR EnsemblPlants; AT5G41890.1; AT5G41890.1; AT5G41890. [Q9FJ25-2]
DR GeneID; 834194; -.
DR Gramene; AT5G41890.1; AT5G41890.1; AT5G41890. [Q9FJ25-2]
DR KEGG; ath:AT5G41890; -.
DR Araport; AT5G41890; -.
DR TAIR; locus:2153000; AT5G41890.
DR eggNOG; ENOG502QR7P; Eukaryota.
DR HOGENOM; CLU_015101_0_0_1; -.
DR InParanoid; Q9FJ25; -.
DR OMA; PSVFQDS; -.
DR OrthoDB; 704138at2759; -.
DR PhylomeDB; Q9FJ25; -.
DR BioCyc; ARA:AT5G41890-MON; -.
DR PRO; PR:Q9FJ25; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FJ25; baseline and differential.
DR Genevisible; Q9FJ25; AT.
DR GO; GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.
DR GO; GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.
DR CDD; cd01837; SGNH_plant_lipase_like; 1.
DR Gene3D; 3.40.50.1110; -; 1.
DR InterPro; IPR001087; GDSL.
DR InterPro; IPR036514; SGNH_hydro_sf.
DR InterPro; IPR035669; SGNH_plant_lipase-like.
DR Pfam; PF00657; Lipase_GDSL; 1.
PE 3: Inferred from homology;
KW Alternative splicing; Hydrolase; Lipid degradation; Lipid metabolism;
KW Reference proteome.
FT CHAIN 1..369
FT /note="GDSL esterase/lipase At5g41890"
FT /id="PRO_0000367421"
FT ACT_SITE 32
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
FT ACT_SITE 334
FT /evidence="ECO:0000250"
FT ACT_SITE 337
FT /evidence="ECO:0000250"
FT VAR_SEQ 1..19
FT /note="MCTQDETIFVLHDQQSNNS -> MDFTYRCSLKPFNCTFLLLWLSHFQ (in
FT isoform 2)"
FT /evidence="ECO:0000305"
FT /id="VSP_042247"
SQ SEQUENCE 369 AA; 40742 MW; 6B1A21B319CDB20A CRC64;
MCTQDETIFV LHDQQSNNSA AQSFTNFIFG DSLVDVGNNN YIFTLSKADS SPYGIDFAPS
NGQPTGRFTN GRTISDIVGE ALGAKSPPPP YLEPNTEANT IRNGINYASG AAGILDDTGL
LFIGRVPLRE QVSNFEKSRE YMVRVIGENG TKEMLKNAMF TITIGSNDIL NYIQPSIPFF
SQDKLPTDVL QDSMVLHLTT HLKRLHQLGG RKFVVVGVGP LGCIPFARAL NLIPAGKCSE
QVNQVVRGYN MKLIHSLKTL NNELRSEDYN TTFVYANSYD LFLKLVLNYQ LFGLKNADKP
CCGGYFPPFA CFKGPNQNSS QAACEDRSKF VFWDAYHPTE AANLIVAKAL LDGDQTVATP
FNIRYLNDL