GDL87_ARATH
ID GDL87_ARATH Reviewed; 376 AA.
AC Q9FIA1;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=GDSL esterase/lipase At5g55050;
DE EC=3.1.1.-;
DE AltName: Full=Extracellular lipase At5g55050;
DE Flags: Precursor;
GN OrderedLocusNames=At5g55050; ORFNames=K13P22.5;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10470850; DOI=10.1093/dnares/6.3.183;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Kotani H.,
RA Miyajima N., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. IX. Sequence
RT features of the regions of 1,011,550 bp covered by seventeen P1 and TAC
RT clones.";
RL DNA Res. 6:183-195(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP REVIEW.
RX PubMed=15522763; DOI=10.1016/j.plipres.2004.09.002;
RA Akoh C.C., Lee G.-C., Liaw Y.-C., Huang T.-H., Shaw J.-F.;
RT "GDSL family of serine esterases/lipases.";
RL Prog. Lipid Res. 43:534-552(2004).
RN [5]
RP GENE FAMILY.
RX PubMed=18819574; DOI=10.3923/pjbs.2008.763.767;
RA Ling H.;
RT "Sequence analysis of GDSL lipase gene family in Arabidopsis thaliana.";
RL Pak. J. Biol. Sci. 11:763-767(2008).
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the 'GDSL' lipolytic enzyme family.
CC {ECO:0000305}.
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DR EMBL; AB017059; BAB10579.1; -; Genomic_DNA.
DR EMBL; CP002688; AED96573.1; -; Genomic_DNA.
DR EMBL; AY072081; AAL59904.1; -; mRNA.
DR EMBL; AY142585; AAN13154.1; -; mRNA.
DR RefSeq; NP_200316.1; NM_124887.5.
DR AlphaFoldDB; Q9FIA1; -.
DR SMR; Q9FIA1; -.
DR STRING; 3702.AT5G55050.1; -.
DR PaxDb; Q9FIA1; -.
DR PRIDE; Q9FIA1; -.
DR ProteomicsDB; 247113; -.
DR EnsemblPlants; AT5G55050.1; AT5G55050.1; AT5G55050.
DR GeneID; 835596; -.
DR Gramene; AT5G55050.1; AT5G55050.1; AT5G55050.
DR KEGG; ath:AT5G55050; -.
DR Araport; AT5G55050; -.
DR TAIR; locus:2151953; AT5G55050.
DR eggNOG; KOG0017; Eukaryota.
DR HOGENOM; CLU_015101_0_2_1; -.
DR InParanoid; Q9FIA1; -.
DR OMA; AQCISFD; -.
DR OrthoDB; 704138at2759; -.
DR PhylomeDB; Q9FIA1; -.
DR BioCyc; ARA:AT5G55050-MON; -.
DR PRO; PR:Q9FIA1; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FIA1; baseline and differential.
DR Genevisible; Q9FIA1; AT.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0009536; C:plastid; HDA:TAIR.
DR GO; GO:0016298; F:lipase activity; IEA:InterPro.
DR GO; GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.
DR CDD; cd01837; SGNH_plant_lipase_like; 1.
DR Gene3D; 3.40.50.1110; -; 1.
DR InterPro; IPR001087; GDSL.
DR InterPro; IPR008265; Lipase_GDSL_AS.
DR InterPro; IPR036514; SGNH_hydro_sf.
DR InterPro; IPR035669; SGNH_plant_lipase-like.
DR Pfam; PF00657; Lipase_GDSL; 1.
DR PROSITE; PS01098; LIPASE_GDSL_SER; 1.
PE 2: Evidence at transcript level;
KW Glycoprotein; Hydrolase; Lipid degradation; Lipid metabolism;
KW Reference proteome; Secreted; Signal.
FT SIGNAL 1..29
FT /evidence="ECO:0000255"
FT CHAIN 30..376
FT /note="GDSL esterase/lipase At5g55050"
FT /id="PRO_0000367427"
FT ACT_SITE 46
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
FT ACT_SITE 340
FT /evidence="ECO:0000250"
FT ACT_SITE 344
FT /evidence="ECO:0000250"
FT CARBOHYD 134
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 245
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 376 AA; 41447 MW; A84F90BEFD42D9B5 CRC64;
MPTNNTPFLT IFLLFLGLLR FDSFPGLEAA TGKLASIPGL YVFGDSLVDA GNNNYLPISI
SKANYPHNGV DFPNKKPTGR FCNGKNAADA IAEKFGLPLP PPYLSLRGLL KREKRKSAAV
TGVNFASGGA GIFNSSDQKL GQAIPLSKQV NNWLSIHEEV MKLEPSAAQL HLSKSLFTVV
IGSNDLFDYF GSFKLRRQSN PQQYTQLMAD KLKEQLKRIH DSGARRFLII GVAQIGCTPG
KRAKNSTLHE CDEGANMWCS LYNEALVKML QQLKQELQGS ITYTYFDNYK SLHDIISNPA
RYGFADVTSA CCGNGELNAD LPCLPLAKLC SDRTKHLFWD RYGHPTEAAA RTIVDLMLTD
DTHYSSPITL TQLVST
