GDL88_ARATH
ID GDL88_ARATH Reviewed; 242 AA.
AC Q9FM04;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 31-MAY-2011, sequence version 3.
DT 03-AUG-2022, entry version 113.
DE RecName: Full=GDSL esterase/lipase At5g62930;
DE EC=3.1.1.-;
GN OrderedLocusNames=At5g62930; ORFNames=MQB2.25;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9628582; DOI=10.1093/dnares/5.1.41;
RA Sato S., Kaneko T., Kotani H., Nakamura Y., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. IV. Sequence
RT features of the regions of 1,456,315 bp covered by nineteen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:41-54(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP REVIEW.
RX PubMed=15522763; DOI=10.1016/j.plipres.2004.09.002;
RA Akoh C.C., Lee G.-C., Liaw Y.-C., Huang T.-H., Shaw J.-F.;
RT "GDSL family of serine esterases/lipases.";
RL Prog. Lipid Res. 43:534-552(2004).
RN [5]
RP GENE FAMILY.
RX PubMed=18819574; DOI=10.3923/pjbs.2008.763.767;
RA Ling H.;
RT "Sequence analysis of GDSL lipase gene family in Arabidopsis thaliana.";
RL Pak. J. Biol. Sci. 11:763-767(2008).
CC -!- SIMILARITY: Belongs to the 'GDSL' lipolytic enzyme family.
CC {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AB009053; BAB10862.1; -; Genomic_DNA.
DR EMBL; CP002688; AED97675.1; -; Genomic_DNA.
DR EMBL; AF462837; AAL58925.1; -; mRNA.
DR EMBL; AY124825; AAM70534.1; -; mRNA.
DR RefSeq; NP_201098.1; NM_125687.3.
DR AlphaFoldDB; Q9FM04; -.
DR SMR; Q9FM04; -.
DR BioGRID; 21656; 4.
DR STRING; 3702.AT5G62930.1; -.
DR PaxDb; Q9FM04; -.
DR PRIDE; Q9FM04; -.
DR ProteomicsDB; 221995; -.
DR EnsemblPlants; AT5G62930.1; AT5G62930.1; AT5G62930.
DR GeneID; 836413; -.
DR Gramene; AT5G62930.1; AT5G62930.1; AT5G62930.
DR KEGG; ath:AT5G62930; -.
DR Araport; AT5G62930; -.
DR TAIR; locus:2170738; AT5G62930.
DR eggNOG; KOG3035; Eukaryota.
DR HOGENOM; CLU_051989_0_2_1; -.
DR InParanoid; Q9FM04; -.
DR OMA; HEPAWEK; -.
DR PRO; PR:Q9FM04; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FM04; baseline and differential.
DR Genevisible; Q9FM04; AT.
DR GO; GO:0005783; C:endoplasmic reticulum; IDA:TAIR.
DR GO; GO:0005634; C:nucleus; IDA:TAIR.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.1110; -; 1.
DR InterPro; IPR045136; Iah1-like.
DR InterPro; IPR013830; SGNH_hydro.
DR InterPro; IPR036514; SGNH_hydro_sf.
DR PANTHER; PTHR14209; PTHR14209; 1.
DR Pfam; PF13472; Lipase_GDSL_2; 1.
PE 2: Evidence at transcript level;
KW Hydrolase; Lipid degradation; Lipid metabolism; Reference proteome.
FT CHAIN 1..242
FT /note="GDSL esterase/lipase At5g62930"
FT /id="PRO_0000367428"
FT REGION 223..242
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 11
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
SQ SEQUENCE 242 AA; 27157 MW; E95A1BE9CBCED21D CRC64;
MRPEIVLFGD SITAQSFRSG GWGSALADAY SRKADVVVRG YGGYNTRWAL FLLHHIFPLG
SSSPPVATTI FFGANDAALK GRTSDRQHVP VEEYTDNVRK IVQHLKKCSP TMLIVLITPP
PIDEAGRQSY AESIYGEKAM KEPERTNETT GVYAQHCVAL AEELGLRCVN LWSKMQETND
WQKKYLSDGL HLTPEGNGVV FDEVSRVFRE AWLSPEEMPF DFPHHSHIDG KNPSKAFEER
CL