GEFL_DICDI
ID GEFL_DICDI Reviewed; 2356 AA.
AC B0M0P8; Q8SSN3;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 18-MAR-2008, sequence version 1.
DT 03-AUG-2022, entry version 84.
DE RecName: Full=Ras guanine nucleotide exchange factor L;
DE AltName: Full=RasGEF domain-containing protein L;
GN Name=gefL; Synonyms=rasGEFL; ORFNames=DDB_G0276371;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], DEVELOPMENTAL STAGE, AND DISRUPTION
RP PHENOTYPE.
RC STRAIN=AX4;
RX PubMed=16086850; DOI=10.1186/gb-2005-6-8-r68;
RA Wilkins A., Szafranski K., Fraser D.J., Bakthavatsalam D., Mueller R.,
RA Fisher P.R., Gloeckner G., Eichinger L., Noegel A.A., Insall R.H.;
RT "The Dictyostelium genome encodes numerous RasGEFs with multiple biological
RT roles.";
RL Genome Biol. 6:R68.1-R68.12(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=12097910; DOI=10.1038/nature00847;
RA Gloeckner G., Eichinger L., Szafranski K., Pachebat J.A., Bankier A.T.,
RA Dear P.H., Lehmann R., Baumgart C., Parra G., Abril J.F., Guigo R.,
RA Kumpf K., Tunggal B., Cox E.C., Quail M.A., Platzer M., Rosenthal A.,
RA Noegel A.A.;
RT "Sequence and analysis of chromosome 2 of Dictyostelium discoideum.";
RL Nature 418:79-85(2002).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
CC -!- FUNCTION: Promotes the exchange of Ras-bound GDP by GTP. {ECO:0000250}.
CC -!- DEVELOPMENTAL STAGE: Expressed during development.
CC {ECO:0000269|PubMed:16086850}.
CC -!- DISRUPTION PHENOTYPE: Poor in phototaxis assays.
CC {ECO:0000269|PubMed:16086850}.
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DR EMBL; AY160101; AAN46881.2; -; Genomic_DNA.
DR EMBL; AAFI02000014; EAL69266.2; -; Genomic_DNA.
DR RefSeq; XP_643190.2; XM_638098.2.
DR AlphaFoldDB; B0M0P8; -.
DR SMR; B0M0P8; -.
DR STRING; 44689.DDB0185197; -.
DR PaxDb; B0M0P8; -.
DR PRIDE; B0M0P8; -.
DR EnsemblProtists; EAL69266; EAL69266; DDB_G0276371.
DR GeneID; 8620463; -.
DR KEGG; ddi:DDB_G0276371; -.
DR dictyBase; DDB_G0276371; gefL.
DR eggNOG; KOG0619; Eukaryota.
DR eggNOG; KOG3417; Eukaryota.
DR HOGENOM; CLU_229636_0_0_1; -.
DR InParanoid; B0M0P8; -.
DR Reactome; R-DDI-1169092; Activation of RAS in B cells.
DR Reactome; R-DDI-171007; p38MAPK events.
DR Reactome; R-DDI-193648; NRAGE signals death through JNK.
DR Reactome; R-DDI-354192; Integrin signaling.
DR Reactome; R-DDI-381676; Glucagon-like Peptide-1 (GLP1) regulates insulin secretion.
DR Reactome; R-DDI-392517; Rap1 signalling.
DR Reactome; R-DDI-5673001; RAF/MAP kinase cascade.
DR Reactome; R-DDI-9013148; CDC42 GTPase cycle.
DR Reactome; R-DDI-9013149; RAC1 GTPase cycle.
DR PRO; PR:B0M0P8; -.
DR Proteomes; UP000002195; Chromosome 2.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0003779; F:actin binding; IEA:InterPro.
DR GO; GO:0005085; F:guanyl-nucleotide exchange factor activity; IBA:GO_Central.
DR GO; GO:0031267; F:small GTPase binding; IEA:InterPro.
DR GO; GO:0030036; P:actin cytoskeleton organization; IEA:InterPro.
DR GO; GO:0046956; P:positive phototaxis; IMP:dictyBase.
DR GO; GO:0043547; P:positive regulation of GTPase activity; IBA:GO_Central.
DR GO; GO:0007265; P:Ras protein signal transduction; IBA:GO_Central.
DR GO; GO:0030587; P:sorocarp development; HMP:dictyBase.
DR GO; GO:0043052; P:thermotaxis; IMP:dictyBase.
DR CDD; cd00155; RasGEF; 1.
DR CDD; cd06224; REM; 1.
DR Gene3D; 1.10.840.10; -; 1.
DR Gene3D; 1.25.10.10; -; 1.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR014768; GBD/FH3_dom.
DR InterPro; IPR010473; GTPase-bd.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR008937; Ras-like_GEF.
DR InterPro; IPR000651; Ras-like_Gua-exchang_fac_N.
DR InterPro; IPR023578; Ras_GEF_dom_sf.
DR InterPro; IPR001895; RASGEF_cat_dom.
DR InterPro; IPR036964; RASGEF_cat_dom_sf.
DR PANTHER; PTHR23113; PTHR23113; 1.
DR Pfam; PF06371; Drf_GBD; 1.
DR Pfam; PF13855; LRR_8; 1.
DR Pfam; PF00617; RasGEF; 1.
DR Pfam; PF00618; RasGEF_N; 1.
DR SMART; SM00369; LRR_TYP; 9.
DR SMART; SM00147; RasGEF; 1.
DR SMART; SM00229; RasGEFN; 1.
DR SUPFAM; SSF48366; SSF48366; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
DR PROSITE; PS51232; GBD_FH3; 1.
DR PROSITE; PS51450; LRR; 12.
DR PROSITE; PS50009; RASGEF_CAT; 1.
DR PROSITE; PS50212; RASGEF_NTER; 1.
PE 2: Evidence at transcript level;
KW Guanine-nucleotide releasing factor; Leucine-rich repeat;
KW Reference proteome; Repeat.
FT CHAIN 1..2356
FT /note="Ras guanine nucleotide exchange factor L"
FT /id="PRO_0000384470"
FT REPEAT 46..69
FT /note="LRR 1"
FT REPEAT 72..93
FT /note="LRR 2"
FT REPEAT 94..116
FT /note="LRR 3"
FT REPEAT 117..138
FT /note="LRR 4"
FT REPEAT 140..162
FT /note="LRR 5"
FT REPEAT 163..184
FT /note="LRR 6"
FT REPEAT 186..208
FT /note="LRR 7"
FT REPEAT 209..230
FT /note="LRR 8"
FT REPEAT 233..254
FT /note="LRR 9"
FT REPEAT 256..277
FT /note="LRR 10"
FT REPEAT 279..300
FT /note="LRR 11"
FT REPEAT 302..323
FT /note="LRR 12"
FT REPEAT 325..346
FT /note="LRR 13"
FT DOMAIN 782..1354
FT /note="GBD/FH3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00579"
FT DOMAIN 1956..2077
FT /note="N-terminal Ras-GEF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00135"
FT DOMAIN 2112..2351
FT /note="Ras-GEF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00168"
FT REGION 1..28
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 391..425
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 498..575
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 599..630
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 644..672
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 686..771
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 865..900
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 963..994
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1008..1027
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1218..1244
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1755..1791
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1809..1831
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 865..899
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 971..994
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2356 AA; 262822 MW; 1524A3FBC355B128 CRC64;
MKSMSSGGIN KLFEGSLSKD GKTSRIEHQK IKQSGCPLLI KLMKDNGHIT NVIIKSCRLK
VLPGEISSLG GHLKKLHIED NKIQEIPNLE QLEQLEELIL PNNDIAKFQV SISKLTTLRL
LDLSGNQLGT IPVRLFSLVS MRELYLDENQ FSNFPSHLCE LQKLTTLGFS NNLLKSIPTQ
IGQMIGLKKL ILSGNQMESI PMEISNLKSL THLDCSSNIL SSIPNELGNK LSQLSFLFLQ
HNKLRSIPDE IGQCQSLVSL RLNNNSITLL PQSIGELENL QELYLQENRL NTLPSELGNC
CSLKKLYLEF NKLIALPDRF KRLHCLNVLS LHDNLLDDLP NFLSLEFSQH LIRFTIHNNP
FLRENGIDVI DSLQFLNSHL LSIQNFINNH DQQNDNSNNN NNNNNTTTTT TTTTTTTTTS
TTNNNNTLFT DSYLSSASSS SFLNKSPSGL SLVGSFNGTI KKSISNSSNM NGSGSNGVGH
GSGLTPKLNF KSLITSRDFS SDSDSDTDST SSFSTYSSST INTKRASISP RTSLTLSNSA
SNDSVSAVAN GNGNNNNNNN NNNNNNNNSN NNNSGLVNSI SSFSLSSGQI NYYNISRARR
GTHGNDQPHQ TISPSTSTEK LQQTVSTPRQ QSFFISVLNR RKSSLNNSQN GNNSNNNSNN
NNNNSNNNIS SLSSSNFANS LYNPLMSSSP TSSPSSSYSN LHSSFNGTST PPFSSPSQSS
PLSNSINGIH CNYSNNNNNN NNSNNNNNNN NNNNINNNNN NSNNNNNINT NGNNNSFNGI
IMGSPIYKSF QSLYETLLDD LDYSKKRREE LLNLSVEEKW IFLQRIKPDC TNSLVSNGVY
QLQHQISSND LKTLISSPPK LNSSQQLLSS SSSSSSLSSS STSATHSLQN KSLPSISVCP
KSPRTHMKVL SASSLFTLED ITKLRQQLVS KPVSWVINFA ESTGIVSILS MITTYSQNLI
NNVNKDQPQS QPQPQPQPQP RPQPQQPQPQ QPQPQQLLPL LSQLQPQQQQ QQQQQTQQPQ
PQLQAQTKSD DHFIINECLG CIKLLVELEM QSLLLNDTAE IIFPLILSSQ VSTKRMTFEV
LELICKIFSL GSTIVLESIK NYSKKINEPL TKVFSHITSP LDSEYPADLK VSCMSLINHL
IGSNHLSLEA RIETRSKFLS NDILLIIKNL RIDGEGIETS SWKQLELEMK QFESMMVQDD
NQTSNAEANE LVSNELSQSI DNNNNNNNNN NNNSSTNLVN NNNNNNINSN CNSIINGGNS
SDSLINNSVG TGVGSIMGVG SFMGVNEIEY DSPRKEFDEL KSSNNNNSNS NSVNNFINNI
TEPIMPLTPT EGKLVVIVSM QQTRQQAQLQ QQLQQQLEEE DDDEVPLSSS VATTASTTAN
TTLIEPNHLP IQTREVIVSV QRKSQAGDVI RSLLASNSNL KELGEWGLFV NDSNSNNNNN
NNNNNNNKLS TNVIGRFLKD DEYIFDQMTT SSTSGSLSSD DGATPRLMTR SIPRFKEYRL
KMIPWKVRVS LEKVKEMGLV LNANNTANGQ FNESKFIAEA PMDPTMTCTG LVYHLIKKYL
PNVNDRYCLE ADDFGLYLDT NAGGLMWGGG TGGGYWLEPL EKLHDYEIFK DPKSTVALKL
RPKGVKLKFA DGTYEIFRLD LMSPTEKIFQ EISEKVIDSN NNINLSYYGI FVDRQQGGAN
GNGISDSPIL VSQSSSTSLI EESKKQRKPE WLEKGLPLYH YKINSRCCLR FALRPSNITL
LIDISLFKSF QQQQQQQQQQ QQQSTSSSSS SSSSSSVSSN NNSTNNSNNL IGSLNNSINT
ISELDESIDD NGLSSSSSDK EDQISTPSTS NLLSKFQQVD ESISNLKFQL PQPIQSKQII
VQLPLHLPLG EALETDENWI ETGIEREKCS FHFDSFDGIL MNQTQPLNTQ NFTEKNRICV
LMADELEINS EQTNHNKTNI WDEPFDSSTI ICDPDNPGQI RAATLNKLLE QATNNIEKDR
ELMNILLMTY MSFATSDILL DKLVERYNVP EHEKEQKSVV QLHTIVFLKN WLEQQAPQAA
SGGGLEEKFL VRLSEFVDKQ ISLDGYTKIV PQLKKWIDSA LKEKRAYAMP EAARPNQLTT
KLPSLTSSLL DDELFVAQQL TLREYETFKR IQAVEFLGQA WGKPKLQYKA PNLLKMIERF
NKISTGVSTA ILSQPKIKTR VKLICRFIKI AQHCRDLNNY HLLTAFMAGI RNSNVVRLRL
SWAKVPKKHL HILEDLEKIM SMEGSFKEFR TKMAETIPPC IPYLGVYLKD LTFIEEGNPD
SINSLINWGK KKLIYNIISI IQRCQQVSYD FGNQNQSQVA QKSDLVLNYF DSLPIALDEL
LYKISLNLEP RSNFNN