GEI13_CAEEL
ID GEI13_CAEEL Reviewed; 691 AA.
AC P34478;
DT 01-FEB-1994, integrated into UniProtKB/Swiss-Prot.
DT 10-JUL-2007, sequence version 2.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=Gex-3-interacting protein 13;
GN Name=gei-13; ORFNames=F58A4.11;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=7906398; DOI=10.1038/368032a0;
RA Wilson R., Ainscough R., Anderson K., Baynes C., Berks M., Bonfield J.,
RA Burton J., Connell M., Copsey T., Cooper J., Coulson A., Craxton M.,
RA Dear S., Du Z., Durbin R., Favello A., Fraser A., Fulton L., Gardner A.,
RA Green P., Hawkins T., Hillier L., Jier M., Johnston L., Jones M.,
RA Kershaw J., Kirsten J., Laisster N., Latreille P., Lightning J., Lloyd C.,
RA Mortimore B., O'Callaghan M., Parsons J., Percy C., Rifken L., Roopra A.,
RA Saunders D., Shownkeen R., Sims M., Smaldon N., Smith A., Smith M.,
RA Sonnhammer E., Staden R., Sulston J., Thierry-Mieg J., Thomas K.,
RA Vaudin M., Vaughan K., Waterston R., Watson A., Weinstock L.,
RA Wilkinson-Sproat J., Wohldman P.;
RT "2.2 Mb of contiguous nucleotide sequence from chromosome III of C.
RT elegans.";
RL Nature 368:32-38(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [3]
RP INTERACTION WITH GEX-3, AND DISRUPTION PHENOTYPE.
RX PubMed=11922622; DOI=10.1006/bbrc.2002.6717;
RA Tsuboi D., Qadota H., Kasuya K., Amano M., Kaibuchi K.;
RT "Isolation of the interacting molecules with GEX-3 by a novel functional
RT screening.";
RL Biochem. Biophys. Res. Commun. 292:697-701(2002).
CC -!- SUBUNIT: Interacts with gex-3. {ECO:0000269|PubMed:11922622}.
CC -!- DISRUPTION PHENOTYPE: No visible phenotype.
CC {ECO:0000269|PubMed:11922622}.
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DR EMBL; Z22179; CAA80171.2; -; Genomic_DNA.
DR EMBL; Z22173; CAA80171.2; JOINED; Genomic_DNA.
DR PIR; F88561; F88561.
DR PIR; S40983; S40983.
DR RefSeq; NP_499134.2; NM_066733.4.
DR AlphaFoldDB; P34478; -.
DR SMR; P34478; -.
DR BioGRID; 41559; 5.
DR IntAct; P34478; 3.
DR STRING; 6239.F58A4.11; -.
DR EPD; P34478; -.
DR PaxDb; P34478; -.
DR PeptideAtlas; P34478; -.
DR PRIDE; P34478; -.
DR EnsemblMetazoa; F58A4.11.1; F58A4.11.1; WBGene00001570.
DR GeneID; 176364; -.
DR KEGG; cel:CELE_F58A4.11; -.
DR UCSC; F58A4.11; c. elegans.
DR CTD; 176364; -.
DR WormBase; F58A4.11; CE40812; WBGene00001570; gei-13.
DR eggNOG; ENOG502SA89; Eukaryota.
DR HOGENOM; CLU_398633_0_0_1; -.
DR InParanoid; P34478; -.
DR OMA; NQNTINM; -.
DR OrthoDB; 913874at2759; -.
DR PRO; PR:P34478; -.
DR Proteomes; UP000001940; Chromosome III.
DR Bgee; WBGene00001570; Expressed in pharyngeal muscle cell (C elegans) and 3 other tissues.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR003656; Znf_BED.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR SUPFAM; SSF57667; SSF57667; 2.
DR PROSITE; PS50808; ZF_BED; 2.
PE 1: Evidence at protein level;
KW Metal-binding; Reference proteome; Repeat; Zinc; Zinc-finger.
FT CHAIN 1..691
FT /note="Gex-3-interacting protein 13"
FT /id="PRO_0000065375"
FT ZN_FING 194..242
FT /note="BED-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT ZN_FING 424..473
FT /note="BED-type 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT REGION 18..97
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 171..195
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 18..50
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 57..97
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 212
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 215
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 230
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 235
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 443
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 446
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 461
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
FT BINDING 466
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00027"
SQ SEQUENCE 691 AA; 76740 MW; 8A2AF47028FE9007 CRC64;
MTDCSSTLAA LLPTADFTAS LGNSDDHVDV SSFTTTSEST SPPYSSSEHH SPTDQRTETP
TSDSGNASFS PENVATSFES SDRDASPDNL STSSAHLNDL QEKGVVVDEE LQRQLLRFHQ
DFKESLMENN QNTINMMSAA FNQQLFKQTL ANLNTVTPQL PVNIPTGLPM PASPCTTAAS
APSVESTPTK RKRQRRNPVW PYFDVIDGTA RCKQCLYSTK SVFSTNLKVH LRSHHRPDYE
KVIMAEDALN LNALLLSGNT SKLFNVDANR KRMPPMTSSI LMTINKLANQ QQNGEENPLN
AVLRQTIANN GLQQHLQNVQ TQLQAAQAAV QKQQQQQQQQ QIQQQQQQQQ QGAIPQFALN
AANLAALNQL ARNQMQPTPP PVPQVSQDNI INTLNFPAHI KQEIMNAPHG TDANGVPQPK
RRRLRRHPVW VYFKDLEDRM VGCTNCEFRT GSAFSTNLKM HLKAHHKDDY EKVLQLEEEM
RLEEGCFGPG NKFKTELIDY IRGGGNVTTP PTPNSSSFPS TPKTPQLVQQ IISQSFARSQ
SPNVIQNGEI KIKKECEDDM FSGLSSTDKL AALVGIAGQE VKKEEAMPAN FEEFRQRLLA
NSSLSSFLGQ STAQPIAVDL NGSVIASETK SPCSSNEDDR KQERDKALAR LWADNETLLT
NTHFREFVHC LAPEYEIPDV DILATSLVDQ Y