GEML1_ARATH
ID GEML1_ARATH Reviewed; 259 AA.
AC Q9SE96;
DT 13-NOV-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 106.
DE RecName: Full=GEM-like protein 1;
DE AltName: Full=Forming homology-interacting protein 1;
DE Short=FH-interacting protein 1;
GN Name=FIP1; OrderedLocusNames=At1g28200; ORFNames=F3H9.14;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND INTERACTION WITH AFH1.
RC STRAIN=cv. Landsberg erecta;
RX PubMed=10929945; DOI=10.1093/pcp/41.5.617;
RA Banno H., Chua N.-H.;
RT "Characterization of the Arabidopsis formin-like protein AFH1 and its
RT interacting protein.";
RL Plant Cell Physiol. 41:617-626(2000).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBUNIT: Interacts with AFH1. {ECO:0000269|PubMed:10929945}.
CC -!- SIMILARITY: Belongs to the GEM family. {ECO:0000305}.
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DR EMBL; AF174428; AAF14549.1; -; mRNA.
DR EMBL; AC021044; AAF98435.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE30930.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM60570.1; -; Genomic_DNA.
DR EMBL; AF370177; AAK43992.1; -; mRNA.
DR EMBL; AY056389; AAL08245.1; -; mRNA.
DR EMBL; AY059137; AAL15243.1; -; mRNA.
DR EMBL; AY086994; AAM64555.1; -; mRNA.
DR PIR; A86408; A86408.
DR RefSeq; NP_001322847.1; NM_001332805.1.
DR RefSeq; NP_174141.1; NM_102585.3.
DR AlphaFoldDB; Q9SE96; -.
DR SMR; Q9SE96; -.
DR BioGRID; 24949; 7.
DR STRING; 3702.AT1G28200.1; -.
DR SwissPalm; Q9SE96; -.
DR PaxDb; Q9SE96; -.
DR PRIDE; Q9SE96; -.
DR ProteomicsDB; 224769; -.
DR EnsemblPlants; AT1G28200.1; AT1G28200.1; AT1G28200.
DR EnsemblPlants; AT1G28200.2; AT1G28200.2; AT1G28200.
DR GeneID; 839714; -.
DR Gramene; AT1G28200.1; AT1G28200.1; AT1G28200.
DR Gramene; AT1G28200.2; AT1G28200.2; AT1G28200.
DR KEGG; ath:AT1G28200; -.
DR Araport; AT1G28200; -.
DR TAIR; locus:2032185; AT1G28200.
DR eggNOG; ENOG502QUDB; Eukaryota.
DR HOGENOM; CLU_063785_1_0_1; -.
DR InParanoid; Q9SE96; -.
DR OMA; APRNTMD; -.
DR OrthoDB; 1201777at2759; -.
DR PhylomeDB; Q9SE96; -.
DR PRO; PR:Q9SE96; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9SE96; baseline and differential.
DR Genevisible; Q9SE96; AT.
DR GO; GO:0005634; C:nucleus; HDA:TAIR.
DR Gene3D; 2.30.29.30; -; 1.
DR InterPro; IPR037848; GEM-like.
DR InterPro; IPR004182; GRAM.
DR InterPro; IPR011993; PH-like_dom_sf.
DR PANTHER; PTHR31969; PTHR31969; 1.
DR Pfam; PF02893; GRAM; 1.
DR SMART; SM00568; GRAM; 1.
PE 1: Evidence at protein level;
KW Reference proteome.
FT CHAIN 1..259
FT /note="GEM-like protein 1"
FT /id="PRO_0000311665"
FT DOMAIN 138..215
FT /note="GRAM"
FT REGION 1..79
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..20
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 39..54
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 58..78
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 259 AA; 27958 MW; 2069FF2BDE1A37F8 CRC64;
MSGQENHDHG RISSTPAAAS EPSKAAAHSS DYAPYPKLDP TDVTPPPPQP IPTGAAATTM
PAESNPYVSP SPAPRNTMDS VKDTLGKWGK MAADATKKAE DLAGNFWQHL KTGPSVADAA
VSRIAQGTKI LAEGGYEKVF KQTFDCLPDE KLLKTYACYL STSAGPVLGV MYLSTHKLAF
SSDNPLSYKE GEQTLWSYYK VVLPANQLKA VNPSTSRVNT SDKYIQVISI DNHEFWFMGF
VTYESAVKSL QEAVQSHGP
