GEML4_ARATH
ID GEML4_ARATH Reviewed; 222 AA.
AC Q9FTA0; Q8GWV3;
DT 13-NOV-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 25-MAY-2022, entry version 89.
DE RecName: Full=GEM-like protein 4;
GN OrderedLocusNames=At5g08350; ORFNames=F8L15_80;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 118-222.
RC STRAIN=cv. Columbia;
RX PubMed=11910074; DOI=10.1126/science.1071006;
RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA Shinagawa A., Shinozaki K.;
RT "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL Science 296:141-145(2002).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 135-222.
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- SIMILARITY: Belongs to the GEM family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAC43217.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AL392174; CAC08335.1; -; Genomic_DNA.
DR EMBL; CP002688; AED91288.1; -; Genomic_DNA.
DR EMBL; AY085900; AAM63112.1; -; mRNA.
DR EMBL; AK118619; BAC43217.1; ALT_INIT; mRNA.
DR EMBL; BT004668; AAO42914.1; -; mRNA.
DR RefSeq; NP_196452.1; NM_120919.4.
DR AlphaFoldDB; Q9FTA0; -.
DR STRING; 3702.AT5G08350.1; -.
DR PaxDb; Q9FTA0; -.
DR PRIDE; Q9FTA0; -.
DR EnsemblPlants; AT5G08350.1; AT5G08350.1; AT5G08350.
DR GeneID; 830733; -.
DR Gramene; AT5G08350.1; AT5G08350.1; AT5G08350.
DR KEGG; ath:AT5G08350; -.
DR Araport; AT5G08350; -.
DR TAIR; locus:2150823; AT5G08350.
DR eggNOG; ENOG502QUKI; Eukaryota.
DR HOGENOM; CLU_063785_0_1_1; -.
DR InParanoid; Q9FTA0; -.
DR OMA; SHCYLST; -.
DR OrthoDB; 1311136at2759; -.
DR PhylomeDB; Q9FTA0; -.
DR PRO; PR:Q9FTA0; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FTA0; differential.
DR Genevisible; Q9FTA0; AT.
DR Gene3D; 2.30.29.30; -; 1.
DR InterPro; IPR037848; GEM-like.
DR InterPro; IPR004182; GRAM.
DR InterPro; IPR011993; PH-like_dom_sf.
DR PANTHER; PTHR31969; PTHR31969; 1.
DR Pfam; PF02893; GRAM; 1.
DR SMART; SM00568; GRAM; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..222
FT /note="GEM-like protein 4"
FT /id="PRO_0000311668"
FT DOMAIN 95..173
FT /note="GRAM"
SQ SEQUENCE 222 AA; 25254 MW; F060CA31E693E8B9 CRC64;
MNMSRVEQQV IRYPAAKATP VGYLPDPASF NKFRVPASSK KSEQSNVKSI LKRKKTDGFT
NGVRDQSKIR PKLTETVKRK LSLGARILQV GGLEKIFKRL FRVSEGEKLF KMYQCYLSTT
AGPIAGLLFI SSKKMAFCSE RSIKVDSPQG DIIRVHYKVS IPLCKIDRVN QSQNTKKPSQ
KYLEVVTVDG FDFWFMGFLS YQKAFNCLEK ALSLSFEDNK EQ
