GEML5_ARATH
ID GEML5_ARATH Reviewed; 272 AA.
AC Q9LYV6;
DT 13-NOV-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 91.
DE RecName: Full=GEM-like protein 5;
GN OrderedLocusNames=At5g13200; ORFNames=T19L5.4, T31B5_20;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Shinn P., Chen H., Cheuk R.F., Kim C.J., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=19376835; DOI=10.1104/pp.109.138677;
RA Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A.,
RA Grossmann J., Gruissem W., Baginsky S.;
RT "Large-scale Arabidopsis phosphoproteome profiling reveals novel
RT chloroplast kinase substrates and phosphorylation networks.";
RL Plant Physiol. 150:889-903(2009).
CC -!- SIMILARITY: Belongs to the GEM family. {ECO:0000305}.
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DR EMBL; AL163491; CAB86627.1; -; Genomic_DNA.
DR EMBL; AL391711; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002688; AED91863.1; -; Genomic_DNA.
DR EMBL; BT010714; AAR20771.1; -; mRNA.
DR EMBL; BT012428; AAS92344.1; -; mRNA.
DR EMBL; AK229276; BAF01140.1; -; mRNA.
DR PIR; T48567; T48567.
DR RefSeq; NP_196824.1; NM_121323.4.
DR AlphaFoldDB; Q9LYV6; -.
DR SMR; Q9LYV6; -.
DR STRING; 3702.AT5G13200.1; -.
DR iPTMnet; Q9LYV6; -.
DR PaxDb; Q9LYV6; -.
DR PRIDE; Q9LYV6; -.
DR ProteomicsDB; 224773; -.
DR DNASU; 831159; -.
DR EnsemblPlants; AT5G13200.1; AT5G13200.1; AT5G13200.
DR GeneID; 831159; -.
DR Gramene; AT5G13200.1; AT5G13200.1; AT5G13200.
DR KEGG; ath:AT5G13200; -.
DR Araport; AT5G13200; -.
DR TAIR; locus:2183901; AT5G13200.
DR eggNOG; ENOG502QUDB; Eukaryota.
DR HOGENOM; CLU_063785_1_1_1; -.
DR InParanoid; Q9LYV6; -.
DR OMA; NYEKATH; -.
DR OrthoDB; 1198511at2759; -.
DR PhylomeDB; Q9LYV6; -.
DR PRO; PR:Q9LYV6; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LYV6; baseline and differential.
DR Genevisible; Q9LYV6; AT.
DR GO; GO:0009536; C:plastid; HDA:TAIR.
DR GO; GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.
DR GO; GO:0098755; P:maintenance of seed dormancy by absisic acid; IMP:TAIR.
DR GO; GO:0010029; P:regulation of seed germination; IMP:TAIR.
DR GO; GO:0009845; P:seed germination; IMP:TAIR.
DR Gene3D; 2.30.29.30; -; 1.
DR InterPro; IPR037848; GEM-like.
DR InterPro; IPR004182; GRAM.
DR InterPro; IPR011993; PH-like_dom_sf.
DR PANTHER; PTHR31969; PTHR31969; 1.
DR Pfam; PF02893; GRAM; 1.
DR SMART; SM00568; GRAM; 1.
PE 1: Evidence at protein level;
KW Reference proteome.
FT CHAIN 1..272
FT /note="GEM-like protein 5"
FT /id="PRO_0000311669"
FT DOMAIN 143..221
FT /note="GRAM"
FT REGION 1..42
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 24..38
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 272 AA; 30071 MW; 38EC3E423774C009 CRC64;
MTGSQEDQPK IIIDQEQPKT LETEHQPEPS SSSPDQKKWG THVMGAPAAP VAHPDNQQAA
AWVAGDNQQT QYQPYVIYSP VEHPTTNNPL EPVIGMFHTW SRKAETVARN LWHNLKTGPS
MSETAWGKVN LTAKAITKGG FESLFRQIFG TEPNETLKKT FACYLSTTTG PVAGTVYLSN
ARVAFCSDRP LYFTAPSGQE SWSYYRVVVP LANVATVNPV VVKETPPEKY IQLTTVDGHD
FWFMGFVNYE KATHHLLTSV SDFQTAHGSV SG
