GGAG_FLV
ID GGAG_FLV Reviewed; 580 AA.
AC P0DOH3;
DT 30-AUG-2017, integrated into UniProtKB/Swiss-Prot.
DT 30-AUG-2017, sequence version 1.
DT 02-JUN-2021, entry version 11.
DE RecName: Full=Glyco-Gag protein;
DE AltName: Full=Gross cell surface antigen;
DE AltName: Full=glycosylated Pr80 gag;
DE Short=gPr80 Gag;
DE Short=gag-gPr80;
OS Feline leukemia virus.
OC Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus.
OX NCBI_TaxID=11768;
OH NCBI_TaxID=9681; Felidae (cat family).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=6328019; DOI=10.1128/jvi.50.3.884-894.1984;
RA Laprevotte I., Hampe A., Sherr C.J., Galibert F.;
RT "Nucleotide sequence of the gag gene and gag-pol junction of feline
RT leukemia virus.";
RL J. Virol. 50:884-894(1984).
CC -!- FUNCTION: Plays a role in viral particle release. Presumably acts by
CC facilitating the fission of the virion bud at the cell surface.
CC {ECO:0000250|UniProtKB:P0DOG8}.
CC -!- SUBCELLULAR LOCATION: Host cell membrane {ECO:0000250|UniProtKB:P0DOG8,
CC ECO:0000255}; Single-pass membrane protein
CC {ECO:0000250|UniProtKB:P0DOG8}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative initiation; Named isoforms=2;
CC Name=Glyco-Gag protein;
CC IsoId=P0DOH3-1; Sequence=Displayed;
CC Name=Gag polyprotein;
CC IsoId=P10262-1; Sequence=External;
CC -!- PTM: Glycosylated by host. {ECO:0000250|UniProtKB:P0DOG8}.
CC -!- PTM: Cleaved by host near the middle of the molecule, releasing the c-
CC terminal half containing capsid and nucleoprotein domains op GAG.
CC {ECO:0000250|UniProtKB:P0DOG8}.
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DR EMBL; K01803; AAA43055.1; -; Genomic_RNA.
DR SMR; P0DOH3; -.
DR GO; GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0019068; P:virion assembly; IEA:InterPro.
DR Gene3D; 1.10.150.180; -; 1.
DR Gene3D; 1.10.375.10; -; 1.
DR InterPro; IPR000840; G_retro_matrix.
DR InterPro; IPR036946; G_retro_matrix_sf.
DR InterPro; IPR003036; Gag_P30.
DR InterPro; IPR008919; Retrov_capsid_N.
DR InterPro; IPR010999; Retrovr_matrix.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR Pfam; PF01140; Gag_MA; 1.
DR Pfam; PF02093; Gag_p30; 1.
DR Pfam; PF00098; zf-CCHC; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF47836; SSF47836; 1.
DR SUPFAM; SSF47943; SSF47943; 1.
DR SUPFAM; SSF57756; SSF57756; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 3: Inferred from homology;
KW Alternative initiation; Glycoprotein; Host cell membrane; Host membrane;
KW Membrane; Transmembrane; Transmembrane helix.
FT CHAIN 1..580
FT /note="Glyco-Gag protein"
FT /id="PRO_0000441137"
FT TOPO_DOM 1..51
FT /note="Cytoplasmic"
FT /evidence="ECO:0000305"
FT TRANSMEM 52..72
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 73..580
FT /note="Extracellular"
FT /evidence="ECO:0000305"
FT REGION 171..282
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 491..514
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 560..580
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 171..192
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 202..248
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 134
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 572
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
SQ SEQUENCE 580 AA; 65195 MW; 10F8C3775B37042C CRC64;
MSGASSGTAI GAHLFGVSPE YRVLIGDGGA GPSKSLSEVS FSVWYRSRAA RLVILCLVAS
FLVPCLTFLI AEAVMGQTVT TPLSLTLDHW SEVRARAHNQ GVEVRKKKWI TLCEAEWVMM
NVGWPREGTF SLDNISQVEK KIFAPGPHGH PDQVPYITTW RSLATDPPSW VRPFLPPPKP
PTPLPQPLSP QPSAPLTSSL YPVVPKPDPP KPPVLPPDPS SPLIDLLTEE PPPYPGGHGP
PPSGPRTPAA SPIASRLRER RENPAEESQA LPLREGPNNR PQYWPFSASD LYNWKSHNPP
FSQDPVALTN LIESILVTHQ PTWDDCQQLL QALLTGEERQ RVLLEARKQV PGEDGRPTQL
PNVIDETFPL TRPNWDFATP AGREHLRLYR QLLLAGLRGA ARRPTNLAQV KQVVQGKEET
PAAFLERLKE AYRMYTPYDP EDPGQAASVI LSFIYQSSPD IRNKLQRLEG LQGFTLSDLL
KEAEKIYNKR ETPEEREERL WQRQEERDKK RHKEMTKVLA TVVAQNRDKD REENKLGDQR
KIPLGKDQCA YCKEKGHWVR DCPKRPRKKP ANSTLLNLED