GGNB2_CHICK
ID GGNB2_CHICK Reviewed; 698 AA.
AC Q6GVH4; Q5ZJV2;
DT 13-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 19-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=Gametogenetin-binding protein 2;
DE AltName: Full=Protein ZNF403;
GN Name=GGNBP2; Synonyms=ZNF403; ORFNames=RCJMB04_15h5;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
RC STRAIN=CB; TISSUE=Bursa of Fabricius;
RX PubMed=15642376; DOI=10.1016/j.febslet.2004.10.112;
RA Zhang J., Wang Y., Zhou Y., Cao Z., Huang P., Lu B.;
RT "Yeast two-hybrid screens imply that GGNBP1, GGNBP2 and OAZ3 are potential
RT interaction partners of testicular germ cell-specific protein GGN1.";
RL FEBS Lett. 579:559-566(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC STRAIN=CB; TISSUE=Bursa of Fabricius;
RX PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA Hayashizaki Y., Buerstedde J.-M.;
RT "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT function analysis.";
RL Genome Biol. 6:R6.1-R6.9(2005).
CC -!- FUNCTION: May be involved in spermatogenesis. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q6GVH4-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q6GVH4-2; Sequence=VSP_019181;
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DR EMBL; AJ720332; CAG31991.1; -; mRNA.
DR EMBL; AY633743; AAT47122.1; -; mRNA.
DR RefSeq; NP_001001899.1; NM_001001899.1. [Q6GVH4-1]
DR RefSeq; XP_015151295.1; XM_015295809.1. [Q6GVH4-2]
DR AlphaFoldDB; Q6GVH4; -.
DR SMR; Q6GVH4; -.
DR STRING; 9031.ENSGALP00000008651; -.
DR PaxDb; Q6GVH4; -.
DR Ensembl; ENSGALT00000008665; ENSGALP00000008651; ENSGALG00000005397. [Q6GVH4-1]
DR GeneID; 425053; -.
DR KEGG; gga:425053; -.
DR CTD; 79893; -.
DR VEuPathDB; HostDB:geneid_425053; -.
DR eggNOG; ENOG502QQ20; Eukaryota.
DR GeneTree; ENSGT00390000009552; -.
DR HOGENOM; CLU_024870_0_0_1; -.
DR InParanoid; Q6GVH4; -.
DR OMA; SEEKGYC; -.
DR OrthoDB; 398180at2759; -.
DR PhylomeDB; Q6GVH4; -.
DR PRO; PR:Q6GVH4; -.
DR Proteomes; UP000000539; Chromosome 19.
DR Bgee; ENSGALG00000005397; Expressed in testis and 13 other tissues.
DR ExpressionAtlas; Q6GVH4; baseline and differential.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR GO; GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
DR InterPro; IPR026073; GGNBP2.
DR PANTHER; PTHR13601; PTHR13601; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Cytoplasm; Developmental protein; Differentiation;
KW Reference proteome; Spermatogenesis.
FT CHAIN 1..698
FT /note="Gametogenetin-binding protein 2"
FT /id="PRO_0000239351"
FT REGION 555..575
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VAR_SEQ 282
FT /note="G -> GYE (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:15642098"
FT /id="VSP_019181"
FT CONFLICT 104
FT /note="V -> I (in Ref. 2; AAT47122)"
FT /evidence="ECO:0000305"
FT CONFLICT 123
FT /note="S -> P (in Ref. 2; AAT47122)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 698 AA; 79222 MW; B1EE2C32DCCB39BF CRC64;
MARLVAVCRD GEEEFPFEKR QIPLYIDDTL TMVMEFPDNV LNLDGHQNNG AQLKQFIQRH
SMLKQQDLNI AMMVTSREVL SALSQLVPCV GCRRSVERLF SQLVESGNPA LEPLAVGPKG
VLSVTRSCMT DAKKLYTLFY VHGSKLNDMI DAIPKSKKNK RCQLHSLDTH KPKPLGGCWM
DVWELMSQEC RDEVVLIDSS CLLETLETYL RKHRFCTDCK NKVLRAYNIL IGELDCSKEK
GYCAALYEGL RCCPHERHIH VCCETDFIAH LLGRAEPEFA GGRRERHAKT IDIAQEEVLT
CLGIHLYERL HRIWQKLRAE EQTWQMLFYL GVDALRKSFE MAVEKVQGIS RLEQLCEEFS
EEERVRELKQ EKKRQKRKNR RKNKCVCEIP TPLQAAEEKE INQAKENLDF TENSCKACGS
TEEANNCVEV IVTNESTSCT CPSSGTLLGS PKIKKGLSPH CNGSDCGYSS SMEGSETGSR
EGSDVACTEG ICNHDENGDD SCVHRCDDKE EDGDSCVECW ANSEESNTKG KNKKKKKKSK
TLKCENEHIQ KLGSCMADPG NRETSGNTTH TEFHRDKTKD THAESCCSSE KSGQQLPWFE
HMKNVSQFAE PTEMSLVPDT GKGAKSLVEL LDESECTSDE EIFISQDEIQ SFMANNKSFY
SNREQYRQHL KEKFNKYCRL NDHKRPICNG WLTTAGAN