GH109_SHEWM
ID GH109_SHEWM Reviewed; 467 AA.
AC B1KNF7;
DT 02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 29-APR-2008, sequence version 1.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Glycosyl hydrolase family 109 protein;
DE EC=3.2.1.-;
DE Flags: Precursor;
GN OrderedLocusNames=Swoo_1749;
OS Shewanella woodyi (strain ATCC 51908 / MS32).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=392500;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51908 / MS32;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C.,
RA Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA Lykidis A., Zhao J.-S., Richardson P.;
RT "Complete sequence of Shewanella woodyi ATCC 51908.";
RL Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Glycosidase. {ECO:0000250}.
CC -!- COFACTOR:
CC Name=NAD(+); Xref=ChEBI:CHEBI:57540; Evidence={ECO:0000250};
CC Note=Binds 1 NAD(+) per subunit. The NAD(+) cannot dissociate.
CC {ECO:0000250};
CC -!- PTM: Predicted to be exported by the Tat system. The position of the
CC signal peptide cleavage has not been experimentally proven.
CC -!- SIMILARITY: Belongs to the Gfo/Idh/MocA family. Glycosyl hydrolase 109
CC subfamily. {ECO:0000305}.
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DR EMBL; CP000961; ACA86034.1; -; Genomic_DNA.
DR RefSeq; WP_012324380.1; NC_010506.1.
DR AlphaFoldDB; B1KNF7; -.
DR SMR; B1KNF7; -.
DR STRING; 392500.Swoo_1749; -.
DR CAZy; GH109; Glycoside Hydrolase Family 109.
DR EnsemblBacteria; ACA86034; ACA86034; Swoo_1749.
DR KEGG; swd:Swoo_1749; -.
DR eggNOG; COG0673; Bacteria.
DR HOGENOM; CLU_046965_0_0_6; -.
DR OMA; MESGKHA; -.
DR OrthoDB; 1465613at2; -.
DR Proteomes; UP000002168; Chromosome.
DR GO; GO:0016798; F:hydrolase activity, acting on glycosyl bonds; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0008152; P:metabolic process; IEA:UniProtKB-KW.
DR InterPro; IPR000683; Gfo/Idh/MocA-like_OxRdtase_N.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR006311; TAT_signal.
DR InterPro; IPR019546; TAT_signal_bac_arc.
DR Pfam; PF01408; GFO_IDH_MocA; 1.
DR Pfam; PF10518; TAT_signal; 1.
DR SUPFAM; SSF51735; SSF51735; 1.
DR TIGRFAMs; TIGR01409; TAT_signal_seq; 1.
DR PROSITE; PS51318; TAT; 1.
PE 3: Inferred from homology;
KW Glycosidase; Hydrolase; NAD; Reference proteome; Signal.
FT SIGNAL 1..31
FT /note="Tat-type signal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00648"
FT CHAIN 32..467
FT /note="Glycosyl hydrolase family 109 protein"
FT /id="PRO_5000317251"
FT BINDING 66..67
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000250"
FT BINDING 88
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000250"
FT BINDING 137..140
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000250"
FT BINDING 157..158
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000250"
FT BINDING 186
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000250"
FT BINDING 215
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 234
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 246..249
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 246
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000250"
FT BINDING 328
FT /ligand="substrate"
FT /evidence="ECO:0000250"
SQ SEQUENCE 467 AA; 52860 MW; D07F6FC66EE7FADA CRC64;
MKNFNRRAFL KAAGATTAGL VTSGLILPAS AQPQKMPPKP SNGKSVMGLI SPKLSTVRVG
FIGVGQRGYG HVKHFCHLEG VEIKAICDTD PAVLDRAIDF VVEQGLAKPN AYTGSEHTYR
DMLQRDDIDI AIISTPWQWH APMAIDTMEN DKHAFVEVPL AMSVEECWQI VDTAERTQKN
CMMMENVNYG RDELMVLNMV RQGVFGELIH GEAAYIHELR WQMKELESKT GSWRTHWHTK
RNGNLYPTHG LGPVSQYMNI NRGDRFDYLT SMSSPALGRA LYAKREFPAD HERNQLNYIN
GDMSTSLIKT VKGRTIMVQH DTTTPRPYSR HNLIQGTNGV FAGFPNRIAL EQSPFERDEK
GGESFHRWDM DMTRWYDKYD HPLWQQMGKE AERNGGHGGM DFLMLWRMVY CLRNAEPLDQ
DVYDGAAWSV VNILSEESVN NRSNSVTFPD FTRGAWKTGK PLGIVGA